Job Description P0AFQ2 Confidence 94.62% Date Thu Jan 5 11:26:57 GMT 2012 Rank 2 Aligned Residues 90 % Identity 10% Template d2p0sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II PG0945 N-terminal domain-like Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																															.																	.
Query SS confidence																															.																	.
Query Sequence		R	V	G	I	L	L	E	Q	R	S	E	A	A	L	D	F	T	H	T	M	T	G	S	P	Y	I	D	A	T	.	I	S	D	N	R	Q	E	L	I	A	K	M	Q	A	G	K	.	I	R	G	L	V	V	I	P	V	D	F	A	E	Q	M	E	R	A	N	A	T	A	P	I	Q	V	I	T	D	G	S	E	P
Query Conservation																															.																	.
Alig confidence											.	.	.	.	.																.																	.														.	.	.	.	.
Template Conservation											.	.	.	.	.																																															.	.	.	.	.
Template Sequence		T	I	A	I	A	D	R	T	G	.	.	.	.	.	E	Y	E	Q	L	F	K	E	N	D	E	F	R	F	V	H	A	E	K	T	A	E	E	Y	R	K	X	G	A	D	K	S	G	I	D	A	V	L	E	I	R	Q	D	L	L	E	.	.	.	.	.	D	P	N	A	V	A	I	Y	G	Y	K	Q	L	P	A
Template Known Secondary structure								T	T	S	.	.	.	.	.	S	S	G	G	G	G	T	T		S	S	S						S	S																S							S		T	T	T	.	.	.	.	.		T	T	S						S	S
Template Predicted Secondary structure											.	.	.	.	.																																															.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	N	F	V	Q	G	Y	V	E	G	I	W	Q	I	W	Q	M	Q	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	S	N	H	I	S	R	I	L	S	D	Y	L	S	D	K	K	I	A	S	Y
Template Known Secondary structure																						T	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions