Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFQ2
Confidence18.36%DateThu Jan 5 11:26:57 GMT 2012
Rank84Aligned Residues86
% Identity8%Templatec3f6cB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100........ .110.........120.....
Predicted Secondary structure 


















.......





Query SS confidence 























































. . . . . . .
















Query Sequence  KLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPV. . . . . . . DFAEQMERANATAPIQV
Query Conservation     
 

  
       
   
                
   
        
 

 .......                 
Alig confidence 







.














































.......
















Template Conservation 







.
       
   
   
  

        
         
 

 
  
    
               

 
Template Sequence  SLNAIIID. DHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIII
Template Known Secondary structure 

.

TTSSSTT

STT
SSS
TT

S
Template Predicted Secondary structure 


.


























Template SS confidence 















































































   0....... ..10.........20.........30.........40.........50.........60.........70........
 
   126...130.........
Predicted Secondary structure 


Query SS confidence 













Query Sequence  ITDGSEPNTANFVQ
Query Conservation                
Alig confidence 













Template Conservation   
            
Template Sequence  VSAKDHFYGKHCAD
Template Known Secondary structure 



ST
Template Predicted Secondary structure 


Template SS confidence 













   7980.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions