Job Description P46855 Confidence 8.29% Date Thu Jan 5 12:04:27 GMT 2012 Rank 68 Aligned Residues 92 % Identity 17% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.								.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.				.
Query SS confidence																																							.	.	.	.	.	.	.				.
Query Sequence		S	K	D	L	A	N	L	R	K	E	F	N	K	T	V	R	K	N	F	L	I	K	L	A	K	T	S	E	A	S	G	R	F	N	A	E	D	.	.	.	.	.	.	.	L	L	R	.	M	R	K	G	N	V	P	L	N	Y	N	V	H	H	K	L	S	L	D	D	G	G	T	N	D	F	E	N	L	V	L	I
Query Conservation																																							.	.	.	.	.	.	.				.
Alig confidence																									.	.													.	.	.	.	.	.	.				.																				.	.	.	.	.	.
Template Conservation																									.	.																																											.	.	.	.	.	.
Template Sequence		T	R	K	Q	L	D	I	L	E	S	T	D	P	D	V	I	Y	N	T	L	V	K	C	.	.	D	P	D	I	A	T	K	Y	H	P	N	D	Y	R	R	V	Q	R	M	L	E	I	Y	Y	K	T	G	K	K	P	S	E	T	F	N	E	Q	K	I	T	L	K	.	.	.	.	.	.	F	D	T	L	F	L	W
Template Known Secondary structure										T		S												S	.	.							T	S		T	T																S	S								T					B	S	.	.	.	.	.	.	S
Template Predicted Secondary structure																									.	.																																											.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	E	P	Y	H	K	V	F	T	N	M	Q	S	R	I	A	K	G	I	L	V	G	E	S	K	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	S	K	P	E	P	L	F	Q	R	L	D	D	R	V	D	D	M	L	E	R	G	A	L	Q	E	I
Template Known Secondary structure																							T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions