Job Description P76278 Confidence 9.53% Date Thu Jan 5 12:21:32 GMT 2012 Rank 4 Aligned Residues 268 % Identity 9% Template c3mk7K_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit n; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		F	I	H	F	T	S	L	M	L	V	F	G	F	A	M	Y	G	A	W	L	A	P	L	T	I	R	R	L	L	A	K	R	F	L	R	L	Q	Q	H	A	A	V	W	S	L	I	S	A	T	A	M	L	A	V	Q	G	G	L	M	G	.	T	G	W	T	D	V	F	S	P	N	I	W	Q	A	V	L	Q	T	Q
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		I	D	I	L	I	T	I	V	W	V	A	Y	A	V	V	F	F	G	T	L	A	K	R	K	V	K	H	I	Y	V	G	N	W	F	F	G	A	F	I	L	T	V	A	I	L	H	V	V	N	N	L	E	I	P	V	T	A	M	K	S	Y	S	L	Y	A	G	A	T	D	A	M	V	Q	W	W	Y	G	H	N	A
Template Known Secondary structure																							T		S	S	S	S																							T							T	T					S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	G	I	W	L	W	Q	I	V	L	A	L	V	T	L	I	V	A	L	M	Q	P	R	N	M	P	R	L	L	F	M	L	T	T	A	Q	F	I	L	L	A	G	V	G	H	A	T	L	N	E	G	V	T	A	K	I	H	Q	T	N	H	A	I	H	L	I	C	A	A	A	W	F	G	G	L	L	P	V	L
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		V	G	F	F	L	T	A	G	F	L	G	I	M	Y	Y	F	V	P	K	Q	A	E	R	P	V	Y	S	Y	R	L	S	I	V	H	F	W	A	L	I	T	V	Y	I	W	A	G	P	H	H	L	H	Y	T	A	L	P	D	W	A	Q	S	L	G	M	.	V	M	S	L	I	L	L	A	P	S	W	G	G	M	I
Template Known Secondary structure					T	T	T																T				S																			T	G	G	G	S	S	T	T	S	S	S										.						T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	M	Q	L	I	K	G	R	W	R	H	Q	A	I	Q	A	L	M	R	F	S	W	C	G	H	F	A	V	I	G	V	L	A	S	G	V	L	N	A	L	L	I	T	G	F	P	P	T	L	T	T	Y	W	G	Q	L	L	L	L	K	A	I	L	V	M	I	M	V	V	I	A	L	A	N	R	Y	V	L	V
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		N	G	M	M	T	L	S	G	A	W	H	K	L	R	S	D	P	I	L	R	F	L	V	V	S	L	A	F	Y	G	M	S	T	F	E	G	P	M	M	A	I	K	T	V	N	A	L	.	.	S	H	Y	T	D	W	T	I	G	H	V	H	A	G	A	L	G	W	V	A	M	V	S	I	G	A	L	Y	H	L	V
Template Known Secondary structure					G	G	G	T	T	G	G	G																													T	S							.	.		T	T	S														T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	M	R	Q	D	E	D	R	A	A	P	W	F	V	W	M	T	K	L	E	W	A	I	G	A	V	V	L	V	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	V	F	G	R	E	Q	M	H	S	I	G	L	I	N	T	H	F	W	L	A	T	I	G	T	V	L	Y	I	A	S
Template Known Secondary structure					T	T		S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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