Job Description P76278 Confidence 2.19% Date Thu Jan 5 12:21:32 GMT 2012 Rank 42 Aligned Residues 107 % Identity 21% Template c3eh4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c oxidase subunit 1; PDBTitle: structure of the reduced form of cytochrome ba3 oxidase from thermus2 thermophilus Resolution 2.90 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.																													.	.
Query SS confidence																																					.	.	.	.	.	.	.	.																													.	.
Query Sequence		Q	A	I	Q	A	L	M	R	F	S	W	C	G	H	F	A	V	I	G	V	L	A	S	G	V	L	N	A	L	L	I	T	G	F	P	.	.	.	.	.	.	.	.	P	T	L	T	T	Y	W	G	Q	L	L	L	L	K	A	I	L	V	M	I	M	V	V	I	A	L	A	N	.	.	R	Y	V	L	V	P	R
Query Conservation																																					.	.	.	.	.	.	.	.																													.	.
Alig confidence																																					.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		P	E	K	K	A	T	L	Y	F	L	V	L	G	F	L	A	L	I	V	G	S	L	F	G	P	F	Q	A	L	N	Y	G	N	V	D	A	Y	P	L	L	K	R	L	L	P	F	V	Q	S	Y	Y	Q	G	L	T	L	H	G	V	L	N	A	I	V	F	T	Q	L	F	A	Q	A	I	M	V	Y	L	P	A	R
Template Known Secondary structure																																	T	T											S	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Q	D	E	D	R	A	A	P	W	F	V	W	M	T	K	L	E	W	A	I	G	A	V	V	L	V	I	I	S	L	L	A	T	L	E	P	F
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		E	L	N	M	R	P	N	.	.	M	G	L	M	W	L	S	W	W	M	A	F	I	G	L	V	V	A	A	L	P	L	L	A	N	E	A	T	V	L
Template Known Secondary structure				T					.	.	T	T																						T	T	S			S
Template Predicted Secondary structure									.	.
Template SS confidence
		96	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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