Job Description P77585 Confidence 99.47% Date Thu Jan 5 12:30:48 GMT 2012 Rank 64 Aligned Residues 249 % Identity 16% Template c3tc8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase; PDBTitle: crystal structure of a hypothetical zn-dependent exopeptidase2 (bdi_3547) from parabacteroides distasonis atcc 8503 at 1.06 a3 resolution Resolution 1.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.													.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	L	L	K	A	L	S	E	A	.	.	.	D	A	I	A	S	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	V	R	F	D	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	I	R	L	N	E	S	T	G	P	K	V	M	I	C	A	H	M	D	E	V	G
Query Conservation												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	Y	V	A	N	Q	V	A	F	G	P	R	V	P	N	T	A	A	H	K	A	C	G	D	Y	L	A	S	E	L	K	R	F	G	A	K	V	Y	Q	Q	E	A	I	L	T	A	Y	D	G	T	K	L	E	A	R	N	I	I	G	S	F	D	P	E	N	S	K	R	V	L	L	F	A	H	W	D	S	R	P
Template Known Secondary structure											T					T	T	S																	T	T													T	T	S													S	T	T		S	S												S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	V	R	S	I	S	R	E	G	A	I	D	V	L	P	V	G	N	V	R	M	A	A	R	Q	L	Q	P	V	R	I	T	T	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	A	M	R	V	D	I	G	A	R	S	Y	D	E	V	M	Q	A	G	I	R	P	G	D	R	V	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	D	H	D	P	D	P	S	K	H	R	T	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		S	S	G	G	G	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		F	D	T	T	F	Q	V	L	P	H	Q	R	V	M	G	K	A	F	D	D	R	L	G	C	Y	L	L	V	T	L	L	R	E	L	H	D	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	.	.	.	V	S	P	D	V	A	I	V	L	D	T	A	C
Query Conservation																																																																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	D	G	G	S	G	V	G	A	L	L	E	I	A	R	Q	I	G	Q	K	A	P	G	I	G	I	D	I	I	F	F	D	A	E	D	Y	G	T	P	E	F	V	T	D	Y	T	P	D	S	W	C	L	G	T	Q	F	W	A	K	N	P	H	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T																	S			S	S									S		S		S			T	T			S			T	T		S										S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																												.	.	.																			.
Query SS confidence																																																												.	.	.																			.
Query Sequence		W	A	K	N	F	D	Y	G	A	A	N	H	R	Q	I	G	N	G	P	M	L	V	L	S	D	K	S	L	I	A	P	P	K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	A	D	M	F	S	N	G	G	.	.	.	T	D	G	G	A	V	H	L	T	G	T	G	V	P	T	V	V	M	.
Query Conservation																																																												.	.	.																			.
Alig confidence																																																												.	.	.										.	.								.
Template Conservation																																																																								.	.
Template Sequence		P	N	Y	T	A	E	Y	G	I	L	L	D	X	V	G	G	K	N	A	T	F	F	K	E	Q	Q	S	L	R	A	A	A	P	I	V	E	X	V	W	S	A	A	R	D	L	G	Y	G	K	Y	F	I	N	A	A	G	G	A	I	T	D	D	H	Q	Y	V	I	S	G	R	.	.	N	I	P	S	I	D	I	I
Template Known Secondary structure		T	T				S							S			B	T	T																												T		T	T	T																					.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.
									301	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.	.										.	.	.
Query SS confidence		.	.	.	.	.	.	.										.	.	.
Query Sequence		.	.	.	.	.	.	.	G	P	A	T	R	H	G	H	C	.	.	.	A	A	S	I	A	D	C	R	D	I	L	Q	M	Q	Q	L	L	S	A	L	I	Q	R
Query Conservation		.	.	.	.	.	.	.										.	.	.
Alig confidence		.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		N	Y	D	P	E	S	K	T	G	F	A	S	Y	W	H	T	Q	K	D	N	X	E	N	I	D	R	E	T	L	K	A	A	G	Q	T	V	L	E	V	I	Y	N
Template Known Secondary structure		B			T	T	S	S	S	S	S		T	T	T	T	S	T	T		S	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions