Job Description P77585 Confidence 100.00% Date Thu Jan 5 12:30:48 GMT 2012 Rank 37 Aligned Residues 317 % Identity 14% Template c3n5fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase; PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43 Resolution 2.75 Å

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		3	.	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		L	S	L	L	K	A	L	S	E	A	.	.	.	.	.	.	.	.	.	.	D	A	I	A	S	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	V	R	F	D	G	L	G	S	V	L	I	R	L	N	E	S	T	G	.	.	P	K	V	M	I	C	A	H	M	D	E	V	G	F	M	V
Query Conservation												.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																											.	.																.
Template Conservation																																																																																	.
Template Sequence		W	Q	R	L	M	E	L	G	E	V	G	K	Q	P	S	G	G	V	T	R	L	S	F	T	A	E	E	R	R	A	K	D	L	V	A	S	Y	M	R	E	A	G	L	F	V	Y	E	D	A	A	G	N	L	I	G	R	K	E	G	T	N	P	D	A	T	V	V	L	V	G	S	H	L	D	S	V	Y	N	G	.
Template Known Secondary structure									T	T	T	T	B		T	T	S		B				S	S	S																	T	T							T	T										S	S	T	T	S													T	T	B	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	I	S	R	E	G	A	I	D	V	L	P	V	G	N	V	R	M	A	A	R	Q	L	Q	P	V	R	I	T	T	.	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	C	F	D	G	P	L	G	V	L	A	G	V	E	V	V	Q	T	M	N	E	H	G	V	V	T	H	H	P	I	E	V	V	A	F	T	D	E	E	G	A	R	F	R	F	G	M	I	G	S	R	A	M	A	G	T	L	P	P	E	A	L	E	C	R	D	A	E	G	I	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.		S	S	T	T																	T	T				S	S								S		S	S		T	T	T	S											T				G	G	G	G	G		B		S	S			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																														122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	R	V	D	I	G	A	R	S	Y	D	E	V	M	Q	A	G	I	R	P	G	D	R	V	T	F	D	T	T	F	Q	V	L	P	H	Q	R	V	M	G	K	A	.	.	F	D	D	R	L	G	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation
Template Sequence		A	E	A	M	K	Q	A	G	L	D	P	D	R	L	P	Q	A	A	R	K	P	G	T	V	K	A	Y	V	E	L	H	I	E	Q	G	R	V	L	E	E	T	G	L	P	V	G	I	V	T	G	I	A	G	L	I	W	V	K	F	T	I	E	G	K	A	E	H	A	G	A	T	P	M	S	L	R	R	D	P	M
Template Known Secondary structure								T	T			G	G	G	G	G	G	G				T	T	S											S	S	S						T		S																								T	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	L	V	T	L	L	R	E	L	H	D	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	V	S	P	D	V	A	I	V	L	D	T	A	C	W	A	K	N	F	D	Y	G	A	A	N	H	R	Q	.	.	.	.	.	.	.	.	.	.	.	I	G
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		A	A	A	A	Q	I	I	I	V	I	E	E	E	A	R	R	T	G	T	T	V	G	T	V	G	Q	L	H	V	.	.	.	.	Y	P	G	G	I	N	V	I	P	E	R	V	E	F	V	L	D	L	R	D	L	K	A	E	V	R	D	Q	V	W	K	A	I	A	V	R	A	E	T	I	A	K	E	R	N	V	R
Template Known Secondary structure																		T	S	S											.	.	.	.		S			T	T				S											S	S																							T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		N	G	P	M	L	V	L	S	D	K	S	L	I	A	P	P	K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	A	D	M	F	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T	G	V	P	T	V	V	M	G	P	A	.	T	R	H	G	H	C	A	A	S	I	A	D	C	R	D	I
Query Conservation																																																																	.
Alig confidence																																					.											.	.																.
Template Conservation																																					.											.	.
Template Sequence		V	T	T	E	R	L	Q	E	M	P	P	V	L	C	S	D	E	V	K	R	A	A	E	A	A	C	Q	K	L	G	Y	P	S	F	W	.	L	P	S	G	A	A	H	D	S	V	.	.	Q	L	A	P	I	C	P	I	G	M	I	F	V	R	S	Q	D	G	V	S	H	S	P	A	E	W	S	T	K	E	D	C
Template Known Secondary structure																															T						.					S			T			.	.			T	T	T	S										G	G	G			S	S	T	T
Template Predicted Secondary structure																																					.											.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	M	Q	Q	L	L	S	A	L	I	Q	R	L	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	G	A	E	V	L	Y	H	T	V	W	Q	L	A	Q
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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