Job Description P77585 Confidence 99.96% Date Thu Jan 5 12:30:48 GMT 2012 Rank 46 Aligned Residues 332 % Identity 18% Template c3l6sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aspartyl aminopeptidase; PDBTitle: crystal structure of human aspartyl aminopeptidase (dnpep),2 in complex with aspartic acid hydroxamate Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		S	L	L	K	A	L	S	E	A	D	A	I	A	S	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	D	G	L	G	S	V	L	I	R	L	N	E	S	T	G	P	K	.	.	.	.	V	M	I	C	A	H	M
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		T	A	A	K	E	L	L	K	F	V	N	R	S	P	S	P	F	H	A	V	A	E	C	R	N	R	L	L	Q	A	G	F	S	E	L	K	E	T	E	K	W	N	I	K	P	E	S	K	Y	F	M	T	R	N	S	S	T	I	I	A	F	A	V	G	G	Q	Y	V	P	G	N	G	F	S	L	I	G	A	H	T
Template Known Secondary structure													T		S	S															T	T						T	T	S						T	T								T	T	T									T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		64	.	.	.	.	.	70	.	.				.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure											.	.	.							.	.																								.	.	.	.	.	.	.
Query SS confidence											.	.	.							.	.																								.	.	.	.	.	.	.
Query Sequence		D	E	V	G	F	M	V	R	S	.	.	.	I	S	R	E	G	A	.	.	I	D	V	L	P	V	G	N	V	R	M	A	A	R	Q	L	Q	P	V	R	I	T	T	.	.	.	.	.	.	.	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	A	M	R	V	D	I	G	A	R	S
Query Conservation											.	.	.							.	.																								.	.	.	.	.	.	.
Alig confidence											.	.	.							.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	P	C	L	R	V	K	R	R	S	R	R	S	Q	V	G	F	Q	Q	V	G	V	E	T	Y	G	G	G	I	W	S	T	W	F	D	R	D	L	T	L	A	G	R	V	I	V	K	C	P	T	S	G	R	L	E	Q	Q	L	V	H	V	E	R	P	I	L	R	I	P	H	L	A	I	H	L	Q	R	N	I
Template Known Secondary structure																	T	T										S	S			G	G	G	G	T	T														T	T	T												S			B	B						G	G	G	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		132	.	.	.	.	.																																					.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		Y	D	E	V	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	R	P	G	D	R	V	T	F	D	.	.	.	.	.	.	.	.	T	T	F	Q	V	L	P	H	Q	R	V	M	G	K	A	F	D	D
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	N	F	G	P	N	T	E	M	H	L	V	P	I	L	A	T	A	I	Q	E	E	L	E	K	G	T	E	R	H	H	S	V	L	M	S	L	L	C	A	H	L	G	L	S	P	K	D	I	V	E	M	E	L	C	L	A	D	T	Q	P	A	V	L	G	G	A	Y	D	E	F	I	F	A	P	R	L	D	N
Template Known Secondary structure		T	T						T	T	T	T															T					S													T			G	G	G												S						T	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																							.	.	.	220
Predicted Secondary structure																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	G	C	Y	L	L	V	T	L	L	R	E	L	H	D	.	.	.	.	.	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	V	S	P	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	V	L
Query Conservation																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	S	C	F	C	A	L	Q	A	L	I	D	S	C	A	G	P	G	S	L	A	T	E	P	H	V	R	M	V	T	L	Y	D	N	E	E	V	G	S	E	S	A	Q	G	A	Q	S	L	L	T	E	L	V	L	R	R	I	S	A	S	C	Q	H	P	T	A	F	E	E	A	I	P	K	S	F	M	I	S	A
Template Known Secondary structure																T		S	T	T	T	T	T	T			S								S		G	G	G	T			S	T	T	S	T	T	S	T													S	S		T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		221	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure									.	.	.																						.																															.	.	.
Query SS confidence									.	.	.																						.																															.	.	.
Query Sequence		D	T	A	C	W	A	K	.	.	.	N	F	D	Y	G	A	A	N	H	R	Q	I	G	N	G	P	M	L	V	L	S	.	D	K	S	L	I	A	P	P	K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	A	D	M	F	.	.	.	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T
Query Conservation									.	.	.																						.																															.	.	.
Alig confidence									.	.	.																						.																															.	.	.
Template Conservation
Template Sequence		D	M	A	H	A	V	H	P	N	Y	L	D	K	H	E	E	N	H	R	P	L	F	H	K	G	P	V	I	K	V	N	S	K	Q	R	Y	A	S	N	A	V	S	E	A	L	I	R	E	V	A	N	K	V	K	V	P	L	Q	D	L	M	V	R	N	D	T	P	C	G	T	T	I	G	P	I	L	A	S	R	L
Template Known Secondary structure									T	T	S	G	G	G	S		T	T					T	T	S								T	T	T	T	S																		T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	P	T	V	V	M	G	P	A	T	R	H	G	H	C	A	A	S	I	A	D	C	R	D	I	L	Q	M	Q	Q	L	L	S	A	L	I	Q	R	L	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	R	V	L	D	L	G	S	P	Q	L	A	M	H	S	I	R	E	M	A	C	T	T	G	V	L	Q	T	L	T	L	F	K	G	F	F	E	L	F	P	S
Template Known Secondary structure		T												S	T	T	S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.