Return to main results Retrieve Phyre Job Id

Job DescriptionP77585
Confidence100.00%DateThu Jan 5 12:30:48 GMT 2012
Rank23Aligned Residues325
% Identity15%Templatec3ifeA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'.
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20 .........30...... ...40.........50 .........60........
Predicted Secondary structure 






..........


.




...










Query SS confidence 

















. . . . . . . . . .















.













. . .

















Query Sequence  LSLLKALSEADAIASSEQ. . . . . . . . . . EVRQILLEEADRLQKE. VRFDGLGSVLIRLN. . . ESTGPKVMICAHMDEVGF
Query Conservation 
  
  

 


 

 
 ..........     
   
   
  .
  
  




   ...      
 
  
 


  
Alig confidence 

















..........















.













...

















Template Conservation     
  

 
 
 
                   
   
   
      
  

 

   
      
 
 
 

 
 

 
Template Sequence  IERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATD
Template Known Secondary structure  TS

B

TT

SSSSST

TTS


BSSS





B
TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   6970.........80. ........90.........100. ...
Predicted Secondary structure  ...................................








........







.


Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .












. . . . . . . .



















.


Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MVRSISREGAIDV. . . . . . . . LPVGNVRMAARQLQPVRITT. REE
Query Conservation  ...................................        
    ........    
               .   
Alig confidence  ...................................












........



















.


Template Conservation         
       
                             
 
 
    
 
 
      
 
            
Template Sequence  FTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKH
Template Known Secondary structure  S

SS


TT

SS
TTTT
TTT
TTGGGGTTS


SSS


T
TTS
B
Template Predicted Secondary structure 
















































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   105....110.........120.........130.. .......140.........150.........160. ........170........
Predicted Secondary structure 















.....










.





Query SS confidence 



























. . . . .




























.
















Query Sequence  CKIPGLLDGDRQGNDVSAMRVDIGARSY. . . . . DEVMQAGIRPGDRVTFDTTFQVLPHQRVM. GKAFDDRLGCYLLVTLL
Query Conservation    
       

                ..... 
                   
 
   
 .           
     
Alig confidence 



























.....




























.
















Template Conservation    
       

   
                              
         
   

   
    


      
Template Sequence  GKIRVAFTPDEEIGRGPAHFDVEAFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTHPGTAKNKMRNATKLAMEFN
Template Known Secondary structure 

S
GGGT
TGGG



S



STT

B

B


GGG
TTT
B
Template Predicted Secondary structure 



























Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   179180.........190.........200.........210.........220.........230........ .240..
Predicted Secondary structure 


























................



Query SS confidence 



























































. . . . . . . . . . . . . . . .



Query Sequence  RELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQ. . . . . . . . . . . . . . . . IGNG
Query Conservation    
                
             
                          ................    
Alig confidence 
















.......



































................



Template Conservation    
              .......       
  
  
     

             
                 
   
Template Sequence  GHLPVEEAPEYTEGYEG. . . . . . . FYHLLSLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEMN
Template Known Secondary structure  TS
TT
SGGG

TT

.......
SSSS
GGG
Template Predicted Secondary structure 






.......










Template SS confidence 















































































   246...250.........260.. .......270.........280.........290.........300.........310........
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  PMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQM
Query Conservation                                        



         




  
 
    

  
 
        
Alig confidence 
































.














..




























Template Conservation                 
   
       
     .    




      ..


    
 
    

  
 
 
 

   
Template Sequence  DQYYNMLEKIEPVREIVDIAYEAMKSLNIEPNI. HPIRGGTDGSQLSYM. . GLPTPNIFTGGENYHGKFEYVSVDVMEKA
Template Known Secondary structure 

TGGGTTT


.

BSS

T..T





SSTTSTT
Template Predicted Secondary structure 















.




..















Template SS confidence 















































































   319320.........330.........340.........350. ........360...... ...370.........380.........390.....
 
   323......330.......
Predicted Secondary structure 
Query SS confidence 














Query Sequence  QQLLSALIQRLTRET
Query Conservation    

   
  
    
Alig confidence 














Template Conservation         
       
Template Sequence  VQVIIEIARRFEEQA
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 














   396...400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions