Job Description P77585 Confidence 100.00% Date Thu Jan 5 12:30:48 GMT 2012 Rank 32 Aligned Residues 295 % Identity 20% Template c3cpxC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:aminopeptidase, m42 family; PDBTitle: crystal structure of putative m42 glutamyl aminopeptidase2 (yp_676701.1) from cytophaga hutchinsonii atcc 33406 at 2.39 a3 resolution Resolution 2.39 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		L	S	L	L	K	A	L	S	E	A	D	A	I	A	S	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	V	R	F	.	.	.	.	.	.	.	D	G	L	G	S	V	L	I	R	L	N	E	S	T	G	P	K	V	M	I	C	A	H	M	D	E	V	G	F	M	V	R	S	I	S	R
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.														.	.															.	.	.
Template Conservation																																																											.	.															.	.	.
Template Sequence		X	Q	L	L	K	E	L	C	S	I	H	A	P	S	G	N	E	E	P	L	K	D	F	I	L	E	Y	I	R	S	N	A	G	S	W	S	Y	Q	P	V	I	Y	A	D	N	D	L	Q	D	C	I	V	L	V	F	G	N	.	.	P	R	T	A	V	F	A	H	X	D	S	I	G	F	.	.	.	T	V	S	Y
Template Known Secondary structure											S			B	T	T																	G	G	G	S	S	S							S	G	G	G	T	T							S	S	.	.		S									B				.	.	.				S
Template Predicted Secondary structure																																																											.	.															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	I	D	V	L	P	V	G	N	V	R	M	A	A	R	Q	L	Q	P	V	R	I	T	T	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	A	M	R	V	D	I	G	A	R	S	Y	D	E	V	M	Q	A	G	I	R	P	G	D	R	V	T	F	D	T	T	F	Q	V	L
Query Conservation
Alig confidence																		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	H	L	H	P	I	G	S	P	S	A	K	E	G	Y	.	.	.	.	.	R	L	V	G	K	D	S	N	G	D	I	E	G	V	L	K	I	V	D	E	E	W	X	L	E	T	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	R	G	T	E	V	T	F	K	P	D	F	R	E	E
Template Known Secondary structure		T	T	B					S						T	T		.	.	.	.	.							T	T										G	G	G	S						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120															.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	Q	R	V	M	G	K	A	F	D	D	R	L	G	C	Y	L	L	V	T	L	L	R	E	L	H	D	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	V	S	P	D	V	A	I	V	L	D	T	A	C	W	A	K	N	F	D	Y	G	A	A	N
Query Conservation
Alig confidence				.																								.	.	.	.	.	.															.	.
Template Conservation				.																								.	.	.	.	.	.															.	.
Template Sequence		G	D	.	F	I	L	T	P	Y	L	D	D	R	L	G	V	W	T	A	L	E	L	A	K	T	L	.	.	.	.	.	.	E	H	G	I	I	A	F	T	C	W	E	E	H	G	.	.	G	G	S	V	A	Y	L	A	R	W	I	Y	E	T	F	H	V	K	Q	S	L	I	C	D	I	T	W	V	T	E	G	V
Template Known Secondary structure		T	T	.					T	T																		.	.	.	.	.	.		S							S	S	T	T	T	T	.	.			S																B											S	S	S
Template Predicted Secondary structure				.																								.	.	.	.	.	.															.	.
Template SS confidence
		137	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	Q	I	G	N	G	P	M	L	V	L	S	D	K	S	L	I	A	P	P	K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	A	D	M	F	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T	G	V	P	T	V	V	M	G	P	A	T	R	H	G	H	C	A	A	S	I	A	D
Query Conservation
Alig confidence		.	.														.
Template Conservation		.	.														.
Template Sequence		.	.	E	A	G	K	G	V	A	I	S	X	R	D	R	.	X	I	P	R	K	K	Y	V	N	R	I	I	E	L	A	R	Q	T	D	I	P	F	Q	L	E	V	E	G	A	G	A	S	D	G	R	E	L	Q	L	S	P	Y	P	W	D	W	C	F	I	G	A	P	E	K	D	A	H	T	P	N	E	C	V	H
Template Known Secondary structure		.	.		T	T	S								S	S	.	S															T	T	S										S	S											S	S	S			B			B						B	S	T	T	S	T	T
Template Predicted Secondary structure		.	.														.
Template SS confidence
				208	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	D	I	L	Q	M	Q	Q	L	L	S	A	L	I	Q	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	D	I	E	S	X	V	G	L	Y	K	Y	L	X	E	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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