Job Description P77585 Confidence 100.00% Date Thu Jan 5 12:30:48 GMT 2012 Rank 33 Aligned Residues 315 % Identity 14% Template c2v8gD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-alanine synthase; PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine Resolution 2.5 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		D	A	I	A	S	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	V	R	F	D	G	L	G	S	V	L	I	R	L	N	E	S	T	G	.	P	K	V	M	I	C	A	H	M	D	E	V	G	F	M	V	R	S	I	S	R	E	G	A	I	D	V	L	P	V	G	N	V	R	M	A	A
Query Conservation																																												.
Alig confidence																																												.																.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	T	A	L	D	G	A	M	R	D	W	F	T	N	E	C	E	S	L	G	C	K	V	K	V	D	K	I	G	N	M	F	A	V	Y	P	G	K	N	G	G	K	P	T	A	T	G	S	H	L	D	T	Q	P	E	A	.	.	.	.	.	.	.	.	.	G	K	Y	D	G	I	L	G	V	L	A	G	L
Template Known Secondary structure			T	T	S																T	T	T						B	T	T	S									T	T		S	S												S	S	B	.	.	.	.	.	.	.	.	.		S	S	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	L	Q	P	V	R	I	T	T	.	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	L	R	T	F	K	D	N	N	Y	V	P	N	Y	D	V	C	V	V	V	W	F	N	E	E	G	A	R	F	A	R	S	C	T	G	S	S	V	W	S	H	D	L	S	L	E	E	A	Y	G	L	M	S	V	G	E	D	K	P	E	S	V	Y	D	S	L	K	N	I	G	Y	I	G	D	T	P	A	S	Y
Template Known Secondary structure										T	T				S	S								S			S		S	S	S	S		T	T							T	T	S	S							T		B		S	S		S	S			B								T	T				S	B		S	S	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
								119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.	.																																															.	.
Query SS confidence		.	.	.	.	.	.																																															.	.
Query Sequence		.	.	.	.	.	.	D	V	S	A	M	R	V	D	I	G	A	R	S	Y	D	E	V	M	Q	A	G	I	R	P	G	D	R	V	T	F	D	T	T	F	Q	V	L	P	H	Q	R	V	M	G	K	A	.	.	F	D	D	R	L	G	C	Y	L	L	V	T	L	L	R	E	L	H	D	A	E	L	P	A	E	V
Query Conservation		.	.	.	.	.	.																																															.	.
Alig confidence		.	.	.	.	.	.																																															.	.
Template Conservation
Template Sequence		K	E	N	E	I	D	A	H	F	E	L	H	I	E	Q	G	P	I	L	E	D	E	N	K	A	I	G	I	V	T	G	V	Q	A	Y	N	W	Q	K	V	T	V	H	G	V	G	A	H	A	G	T	T	P	W	R	L	R	K	D	A	L	L	M	S	S	K	M	I	V	A	A	S	E	I	A	Q	R	H	N	G
Template Known Secondary structure		T	T	S			S										S	S					T	T		S																								T	T	T			G	G	G																						T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.															.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	V	S	P	D	V	A	I	V	L	D	T	A	C	W	A	K	N	F	D	Y	G	A	A	N	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	G	N	G	P	M	L	V	L	S	D	K	S	L	I	A	P	P
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		L	F	T	C	G	.	.	.	.	.	I	I	D	A	K	P	Y	S	V	N	I	I	P	G	E	V	S	F	T	L	D	F	R	H	P	S	D	D	V	L	A	T	M	L	K	E	A	A	A	E	F	D	R	L	I	K	I	N	D	G	G	A	L	S	Y	E	S	E	T	L	Q	V	S	P	A	V	N	F	H	E
Template Known Secondary structure							.	.	.	.	.						S			T	T				S											S	S																			T	T			T	T
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		295	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																				.																																.	.
Query SS confidence																				.																																.	.
Query Sequence		K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	.	A	D	M	F	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T	G	V	P	T	V	V	M	G	P	A	T	R	.	.	H	G	H	C	A	A	S	I	A	D	C	R	D	I	L	Q	M	Q	Q	L	L	S	A	L	I	Q	R	L
Query Conservation																				.																																.	.
Alig confidence																				.															.	.	.															.	.
Template Conservation																																			.	.	.
Template Sequence		V	C	I	E	C	V	S	R	S	A	F	A	Q	F	K	K	D	Q	V	R	Q	I	W	S	G	A	G	H	D	S	C	Q	T	.	.	.	A	P	H	V	P	T	S	M	I	F	I	P	S	K	D	G	L	S	H	N	Y	Y	E	Y	S	S	P	E	E	I	E	N	G	F	K	V	L	L	Q	A	I	I	N	Y
Template Known Secondary structure															S		G	G	G							S	S			T					.	.	.	T	T	T	S										G	G	G			S	S	T	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.				.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	T	V	V	Q	L	T	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	Y	R	V	I	R	G	H	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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