Job Description P77585 Confidence 100.00% Date Thu Jan 5 12:30:48 GMT 2012 Rank 20 Aligned Residues 324 % Identity 11% Template c2rb7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.
Predicted Secondary structure																	.	.	.																																	.	.																					.	.	.
Query SS confidence																	.	.	.																																	.	.																					.	.	.
Query Sequence		L	S	L	L	K	A	L	S	E	A	D	A	I	A	S	.	.	.	S	E	Q	E	V	R	Q	I	L	L	E	E	A	D	R	L	Q	K	E	V	R	F	D	G	L	G	S	V	L	I	R	L	.	.	N	E	S	T	G	P	K	V	M	I	C	A	H	M	D	E	V	G	F	M	.	.	.	V	R	S	I	S
Query Conservation																	.	.	.																																	.	.																					.	.	.
Alig confidence																	.	.	.																																	.	.																					.	.	.
Template Conservation
Template Sequence		V	E	L	T	S	D	L	I	R	F	P	S	X	H	S	R	P	E	Q	I	S	R	C	A	G	F	I	X	D	W	C	A	Q	N	G	I	H	A	E	R	X	D	H	D	G	I	P	S	V	X	V	L	P	E	K	G	R	A	G	L	L	L	X	A	H	I	D	V	V	D	A	E	D	D	L	F	V	P	R	V
Template Known Secondary structure										T	S				T	T																			T	T									T	T								S	B	T	T																	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		R	E	G	A	I	D	V	L	P	V	G	N	V	R	M	A	A	R	Q	L	Q	P	V	R	I	T	.	.	.	.	.	.	.	.	.	.	T	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	A	M	R	V	D	I	G	A	R	S	Y	D	E	.	.	.	.	.	.	V	M	Q	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	D	R	L	Y	G	R	G	A	N	D	D	K	Y	A	V	A	L	G	L	V	X	F	R	D	R	L	N	A	L	K	A	A	G	R	S	Q	K	D	X	A	L	G	L	L	I	T	G	D	E	E	I	G	G	X	N	G	A	A	K	A	L	P	L	I	R	A	D	Y	V	V	A	L	D	G	G	N	P	Q
Template Known Secondary structure			T	T				S	T	T	T	T	T	T																					T	T			G	G	G									S		G	G	G	T	S	T	T	T					G	G	G										S	S	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	P	G	D	R	V	T	F	D	T	T	F	Q	V	L	P	H	Q	R	V	M	G	K	A	F	D	D	R	L	G	C	Y	L	L	V	T	L	L	R	E	L	H	D	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q	T	A	T	R	A	V	S	P	D	V	A	I
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		Q	V	I	T	K	E	K	G	I	I	D	I	K	L	T	C	T	G	K	A	A	H	G	A	R	P	W	X	G	V	N	A	V	D	L	L	X	E	D	Y	T	R	L	K	T	L	F	A	E	E	N	E	D	H	W	H	R	T	V	.	N	L	G	R	I	R	A	G	E	S	T	N	K	V	P	D	V	A	E	G
Template Known Secondary structure																				B				T	T	S	G	G	G	S	B															T	T	S					T	T			S				.									S		T	T				S
Template Predicted Secondary structure																																																													.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		V	L	D	T	A	C	W	A	K	N	F	D	Y	G	A	A	N	H	R	Q	.	.	.	I	G	N	G	P	M	L	V	L	S	D	K	S	L	I	A	P	P	K	L	T	A	W	V	E	T	V	A	A	E	I	G	V	P	L	Q	A	D	M	F	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T	G	V
Query Conservation																						.	.	.
Alig confidence																						.	.	.																															.	.	.	.	.	.													.	.
Template Conservation																																																							.	.	.	.	.	.													.	.
Template Sequence		W	F	N	I	R	V	T	E	H	D	D	P	G	A	L	I	D	K	I	R	K	T	V	S	G	T	V	S	I	V	R	T	V	P	V	F	L	A	A	D	S	P	Y	T	E	R	L	L	A	L	S	G	A	.	.	.	.	.	.	T	A	G	K	A	H	G	A	S	D	A	R	.	.	Y	L	G	E	N	G	L
Template Known Secondary structure									T	T	S														S	S																													.	.	.	.	.	.						S	S			G	G	G	.	.	G	T	G	G	G	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.													.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		P	T	V	V	M	G	P	A	.	T	R	H	G	H	C	A	A	S	I	A	D	C	R	D	I	L	Q	M	Q	Q	L	L	S	A	L	I	Q	R	L	T	R
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		T	G	V	V	W	G	A	E	G	F	N	T	L	H	S	R	D	E	C	L	H	I	P	S	L	Q	S	I	Y	D	P	L	X	Q	L	A	R	E	X	E	E
Template Known Secondary structure											T	T		T	T	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions