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Job DescriptionP77585
Confidence100.00%DateThu Jan 5 12:30:48 GMT 2012
Rank18Aligned Residues326
% Identity14%Templatec1cg2D_
PDB info PDB header:metallocarboxypeptidaseChain: D: PDB Molecule:carboxypeptidase g2; PDBTitle: carboxypeptidase g2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20 .........30.........40... ......50.........60.........70.
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Query Sequence  LSLLKALSEADAIASSEQ. . . EVRQILLEEADRLQKEVRFDGLG. . . . . . SVLIRLNESTGPKVMICAHMDEVGFMVR. .
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Template Sequence  IKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNLLLMSHMDTVYLKGILA
Template Known Secondary structure  TS

BTT
TT

STT

S
SS




BS

TT
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   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   72.......80.........90.........100. ........110.........120...... ...130....
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Query Sequence  . . . SISREGAIDVLPVGNVRMAARQLQPVRITT. . . . . REECKIPGLLDGDRQGNDVSAMRVD. . . . . . . . . IGARSYDE
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Template Sequence  KAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEAKLADYVLSFEPTS
Template Known Secondary structure  S

TT
TTTTTTTT


SSS
GGGTTTTT
S


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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   135....140.........150.........160. ........170.........180.........190.........200.........210...
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Query Sequence  VMQAGIRPGDRVTFDTTFQVLPHQRVM. GKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVS
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Template Sequence  AGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKAKNLRFNW. . . . . TIAKAGNVSNIIP
Template Known Secondary structure  TTS
S

B
TTS
GGGSB
GGG
BGGGT.....
SSTT
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   204.....210.........220.........230.........240.........250.........260..... ....270........
 
   214.....220.........230........ .240.........250.... .....260.........270.........280
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Query Sequence  PDVAIVLDTACWAKNFDYGAANHRQ. . . . . . . . IGNGPMLVLSDKSLIA. . . . . PPKLTAWVETVAAEIGVPLQADMFSN
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Template Sequence  ASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEAGGTLGVEERTG
Template Known Secondary structure  SSSTS
SSTT

S


TT


S
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   279280.........290.........300.........310.........320.........330.........340.........350........
 
   281........290........ .300....... ..310.........320.........330.....
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Query Sequence  GGTDGGAVHLTGTGVPTV. VMGPATRHG. HCAASIADCRDILQMQQLLSALIQRLTR
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Template Sequence  GGTDAAYAALS. . GKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLIMDLGA
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TGGG..
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S

TTSSS

GGG
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   359360......... 370.........380.........390.........400.........410...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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