|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | A | V | L | G | A | A | G | G | I | G | Q | A | L | A | L | L | L | K | T | Q | L | P | S | G | S | E | L | S | L | Y | D | I | A | P | V | T | P | G | V | A | V | D | L | S | H | I | P | T | A | V | K | I | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | F | S | G | E | D | A | T | P | A | L |
Query Conservation |   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
| . |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | A | A | V | L | G | . |
A | G | I | M | G | G | G | I | A | Y | Q | S | A | S | K | . |
. |
. |
G | T | P | I | L | M | K | D | I | N | E | H | G | I | E | Q | G | L | A | E | A | A | K | L | L | V | G | R | V | D | K | G | R | M | T | P | A | K | M | A | E | V | L | N | G | I | R | P | T | L | S | Y | G | D | F |
Template Known Secondary structure |   |
S |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | T | T | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
316 | . | . | . | 320 | . | |
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
. | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
  |
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
E | G | A | D | V | V | L | I | S | A | G | V | A | R | K | P | G | M | D | R | S | D | L | F | N | V | N | A | G | I | V | K | N | L | V | Q | Q | V | A | K | T | C | P | K | A | C | I | G | I | I | T | N | P | V | N | T | T | V | A | I | A | A | E | V | L | K | K | A | G | V | Y | D | K | N | K | L | F | G | . |
. |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |
|   |
|
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | N | V | D | L | V | V | E | A | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | N | P | K | V | K | Q | A | V | L | A | E | V | E | N | H | V | R | E | D | A | I | L | A | S | N | T | S | T | I | S | I | S | L | L | A | . |
. |
. |
. |
. |
K | A | L | K | R | P | E | N | F | V | G | M | H | F |
Template Known Secondary structure |   |
G | G |
| S |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T |
|  |  |  |  |
|
| S | S | S |
|  |  |  |  | G | . | . | . | . | . | G | G |
| S |
| G | G | G |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
392 | . | . | . | . | . | . | . | 400 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | T | T | L | D | I | I | R | S | N | T | F | V | A | E | L | K | G | K | Q | P |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
F | N | P | V | H | M | M | P | L | V | E | V | I | R | G | E | K | S | S | D | L | A | V | A | T | T | V | A | Y | A | K | K | M | G | K | N | P |
Template Known Secondary structure |   |
| S | S | T | T | T |
|
|  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
  |