Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 54 Aligned Residues 151 % Identity 24% Template d1oc4a2 SCOP info LDH C-terminal domain-like LDH C-terminal domain-like Lactate & malate dehydrogenases, C-terminal domain Resolution 2.3

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																												.							.	.	.	.	.	.	.	.	.
Query SS confidence																																												.							.	.	.	.	.	.	.	.	.
Query Sequence		V	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	.	Q	V	P	G	V	S	.	.	.	.	.	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E
Query Conservation																																												.							.	.	.	.	.	.	.	.	.
Alig confidence																																												.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	V	L	D	T	S	R	L	K	Y	Y	I	S	Q	K	L	N	V	C	P	R	D	V	N	A	H	I	V	G	A	H	G	N	K	M	V	L	L	K	R	Y	I	T	V	G	G	I	P	L	Q	E	F	I	N	N	K	K	I	T	D	Q	E	L	D	A	I	F	D	R	T	I	N	T	A	L	E	I	V	N
Template Known Secondary structure																			T	S		G	G	G							B		S	S	T	T					G	G	G				T	T									T	T	S	S														T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	A	.	.	.	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L
Query Conservation																																																.	.	.
Alig confidence				.	.	.																				.	.	.	.																			.	.	.																					.
Template Conservation				.	.	.																				.	.	.	.																																										.
Template Sequence		L	H	.	.	.	A	S	P	Y	V	A	P	A	A	A	I	I	E	M	A	E	S	Y	I	.	.	.	.	R	D	L	R	K	V	L	I	C	S	T	L	L	E	G	Q	Y	G	H	K	D	I	F	A	G	T	P	L	V	I	G	G	N	G	V	E	Q	V	I	E	L	.	Q	L	N	A	D	E	K	K	K	F
Template Known Secondary structure			T	.	.	.	S	S																		.	.	.	.	T	T													S	G	G	G														T	T									.
Template Predicted Secondary structure				.	.	.																				.	.	.	.																																										.
Template SS confidence
		242	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	M	L	D	T	L	K	K	D	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	V	A	E	T	S	R	M	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions