 |
| Job Description | P61889 | | Confidence | 95.47% | Date | Thu Jan 5 12:07:26 GMT 2012 |
| Rank | 284 | Aligned Residues | 66 |
| % Identity | 14% | Template | c3uuwB_ |
| PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold |
PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile.
|
| Resolution | 1.63 Å |
|
| | |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
| Predicted Secondary structure | |
|  | | | |  |
|
|
|
|  | | | | | | | | | | | |
|
|
|
|
|
| | | | | | |
| | . | | | | | | | | | | | | | | |
|
|
|
|
|
| | | | |
|
|
| | | | |
|
|
|
| | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | K | V | A | V | L | G | A | A | G | G | I | G | Q | A | L | A | L | L | L | K | T | Q | L | P | S | G | S | E | L | S | L | Y | D | I | A | . |
P | V | T | P | G | V | A | V | D | L | S | H | I | P | T | A | V | K | I | K | G | F | S | G | E | D | A | T | P | A | L | E | G | A | D | V | V | L | I | S |
| Query Conservation | |
|
|
| |
|
|
| | |
| |
|
| | | |
| | |
| | | | | | | | |
|
| |
| |
| | | . | | | | | | | | |
|
| | | | | | | | | | | | | | | | | | | | |
| | |
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
| . | |
| | |
| | | |
| | | |
| | | | | | | |
|
|
|
| |
| | | | | | | | | |
| | | | . | . | . | . | . | . | . | . | . | | | | | | | | | | |
| | | | |
| |
| |
| |
| Template Sequence | |
I | K | M | G | M | I | G | . |
L | G | S | I | A | Q | K | A | Y | L | P | I | L | T | K | S | E | R | F | E | F | V | G | A | F | T | P | N | K | V | K | R | E | K | I | C | S | D | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | M | P | F | D | S | I | E | S | L | A | K | K | C | D | C | I | F | L | H |
| Template Known Secondary structure | |
| | | | | |
| . |
| S | | | | | | | T | | | | | T | S |
| S | S | S | | | | | | |
| S |
| | | | | | | | | | | | . | . | . | . | . | . | . | . | . | T |
|
| B |
| S | S | | | | | | T | T |
| S | | | | |
|
| Template Predicted Secondary structure | |
| | | | | |
| . |
|
| | | | | | | | | | | | | |
|
|
|
| | | | | | |
|
|
| | | | | | | | | | |
| . | . | . | . | . | . | . | . | . |
|
|
| | |
|
| | | | | | |
|
|
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
4 | . | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
