Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 25 Aligned Residues 297 % Identity 28% Template c3p7mC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of putative lactate dehydrogenase from francisella2 tularensis subsp. tularensis schu s4 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																									.
Query SS confidence																																						.																									.
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	.	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G
Query Conservation																																						.																									.
Alig confidence									.																		.	.										.																									.
Template Conservation									.																		.	.
Template Sequence		K	K	I	T	L	V	G	.	A	G	N	I	G	G	T	L	A	H	L	A	L	I	K	Q	L	.	.	G	D	V	V	L	F	D	I	A	Q	G	X	P	N	G	K	A	L	D	L	L	Q	T	C	P	I	E	G	V	D	F	K	V	R	G	T	N	D	Y	K	D	L	E	N	S	D	V	V	I	V	T	A	G
Template Known Secondary structure									.		S													T	T		.	.								S	S	S	S											T	T					T									S		G	G	G	G	T	T		S							S
Template Predicted Secondary structure									.																		.	.
Template SS confidence
		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R	S	N	T	F
Query Conservation																																																																					.
Alig confidence																																																					.	.	.	.													.
Template Conservation																																																					.	.	.	.
Template Sequence		V	P	R	K	P	G	X	S	R	D	D	L	L	G	I	N	I	K	V	X	Q	T	V	G	E	G	I	K	H	N	C	P	N	A	F	V	I	C	I	T	N	P	L	D	I	X	V	N	X	L	Q	.	.	.	.	K	F	S	G	V	P	D	N	K	I	V	G	X	A	G	V	L	D	S	A	R	F	R	T	F
Template Known Secondary structure						T	T																										T	T	S							S	S										.	.	.	.							G	G	G
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	Q	V	.	.	.	.	.	.	.	.	.	.	P	G	V	S	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M
Query Conservation																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																																								.
Template Sequence		L	A	D	E	L	N	V	S	V	Q	Q	V	Q	A	Y	V	X	G	G	H	G	D	T	X	V	P	L	T	K	X	S	N	V	A	G	V	S	L	E	Q	L	V	K	E	G	K	L	K	Q	E	R	L	D	A	I	V	S	R	T	R	S	G	G	G	E	I	V	A	L	L	.	K	T	G	S	A	Y	Y	A	P
Template Known Secondary structure							T			G	G	G									S	G	G	G					T	T	T				T	T									T	T	S	S														T										.	S	S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	.	.	.	.	.	Q	Y	A	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D
Query Conservation																																	.	.	.	.	.
Alig confidence														.	.	.	.																.	.	.	.	.																					.			.
Template Conservation														.	.	.	.																																									.			.
Template Sequence		A	A	A	G	I	Q	X	A	E	S	F	L	.	.	.	.	K	D	K	K	X	I	L	P	C	A	A	K	V	K	A	G	X	Y	G	L	D	E	D	L	F	V	G	V	P	T	E	I	S	A	N	G	V	R	P	I	.	E	V	.	E	I	S	D	K	E	R	E	Q	L	Q	V	S	I	N	A	I	K	D	L
Template Known Secondary structure														.	.	.	.	T	T													T	T	G	G	G		S	S												T	T						.			.
Template Predicted Secondary structure														.	.	.	.																																									.			.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	G	E	E	F	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	A	A	A	E	I	L	A
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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