Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 15 Aligned Residues 292 % Identity 27% Template c3nepX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:malate dehydrogenase; PDBTitle: 1.55a resolution structure of malate dehydrogenase from salinibacter2 ruber Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																									.
Query SS confidence																																						.																									.
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	.	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G
Query Conservation																																						.																									.
Alig confidence									.																.													.																									.
Template Conservation									.																.
Template Sequence		M	K	V	T	V	I	G	.	A	G	N	V	G	A	T	V	A	E	C	V	A	R	Q	.	D	V	A	K	E	V	V	M	V	D	I	K	D	G	M	P	Q	G	K	A	L	D	M	R	E	S	S	P	I	H	G	F	D	T	R	V	T	G	T	N	D	Y	G	P	T	E	D	S	D	V	C	I	I	T	A	G
Template Known Secondary structure									.		S														.	T		S	S							S	S	T	T																	T									S	S	S	G	G	G	T	T		S
Template Predicted Secondary structure									.																.
Template SS confidence
		22	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R	S	N	T	F
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.																																													.	.	.	.													.
Template Conservation		.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	R	D	D	L	L	A	K	N	T	E	I	V	G	G	V	T	E	Q	F	V	E	G	S	P	D	S	T	I	I	V	V	A	N	P	L	D	V	M	T	Y	V	A	Y	.	.	.	.	E	A	S	G	F	P	T	N	R	V	M	G	M	A	G	V	L	D	T	G	R	F	R	S	F
Template Known Secondary structure		.	.	.	.	.	.	.																						T	T		T	T								S	S										.	.	.	.				T			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																.							.	.	.	.
Query SS confidence																																.							.	.	.	.
Query Sequence		V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	.	Q	V	P	G	V	S	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A
Query Conservation																																.							.	.	.	.
Alig confidence																																.							.	.	.	.																									.	.
Template Conservation																																																																			.	.
Template Sequence		I	A	E	E	L	D	V	S	V	R	D	V	Q	A	L	L	M	G	G	H	G	D	T	M	V	P	L	P	R	Y	T	T	V	G	G	I	P	V	P	Q	L	I	D	D	A	R	I	E	E	I	V	E	R	T	K	G	A	G	G	E	I	V	D	L	M	.	.	G	T	S	A	W	Y	A	P	G	A	A	A	A
Template Known Secondary structure							T			G	G	G								S	S	G	G	G											T	T			G	G	G	T	S														T										.	.	S	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	.	.	.	A	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D	I	A	L	G	E	E	F
Query Conservation																														.	.	.
Alig confidence									.	.	.	.																		.	.	.																						.
Template Conservation									.	.	.	.																																										.
Template Sequence		E	M	T	E	A	I	L	.	.	.	.	K	D	N	K	R	I	L	P	C	A	A	Y	C	D	G	E	Y	G	L	D	D	L	F	I	G	V	P	V	K	L	G	A	G	G	V	E	E	V	I	E	V	.	D	L	D	A	D	E	K	A	Q	L	K	T	S	A	G	H	V	H	S	N	L	D	D	L	Q	R	L
Template Known Secondary structure									.	.	.	.		T													S	G	G	G														T	T									.
Template Predicted Secondary structure									.	.	.	.																																										.
Template SS confidence
		256	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	E
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		333	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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