Job Description P61889 Confidence 98.57% Date Thu Jan 5 12:07:26 GMT 2012 Rank 109 Aligned Residues 152 % Identity 15% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.								.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	.	.	.	.	.	.	.	.	.	.	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G
Query Conservation																																						.								.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.	.	.											.								.	.	.	.	.	.	.	.	.	.
Template Conservation									.																.	.	.
Template Sequence		L	D	I	A	V	V	G	.	I	G	Y	V	G	L	V	S	A	T	C	F	A	E	L	.	.	.	G	A	N	V	R	C	I	D	T	D	R	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E
Template Known Secondary structure									.		S													T	.	.	.	T								S										T	T			S	S			T	T											T	T	S					S						G	G	G
Template Predicted Secondary structure									.																.	.	.
Template SS confidence
		79	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		A	D	V	V	L	I	S	A	G	V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	.	.	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																											.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		A	D	I	I	F	I	A	V	G	T	P	A	G	E	D	G	.	.	.	.	.	.	S	A	D	M	S	Y	V	L	D	A	A	R	S	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	E	V	L	I	D	F	D	I	A
Template Known Secondary structure			S										B		T	T	S	.	.	.	.	.	.	S	B																		S								S				T	T																T	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
																			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	N	K	L	F	G	V	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	P	E	F	L	K	E	G	N	A	I	D	D	F	M	K	P	D	R	V	V	V	G	V	D	S	D	R	A	R	E	L	I	T	S	L	Y	K	P	M
Template Known Secondary structure									T	T	S							S		S							S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions