Job Description P61889 Confidence 97.09% Date Thu Jan 5 12:07:26 GMT 2012 Rank 182 Aligned Residues 116 % Identity 18% Template c3b1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V	A	R
Query Conservation
Alig confidence								.																.																							.	.	.	.	.	.	.																									.	.	.	.
Template Conservation								.																.																							.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		T	I	Y	I	A	G	.	L	G	L	I	G	A	S	L	A	L	G	I	K	R	D	.	H	P	H	Y	K	I	V	G	Y	N	R	S	D	R	S	R	D	I	A	L	E	R	.	.	.	.	.	.	.	G	I	V	D	E	A	T	A	D	F	K	V	F	A	A	L	A	D	V	I	I	L	A	V	.	.	.	.
Template Known Secondary structure								.		S														.		T	T	S							S	S										T	.	.	.	.	.	.	.	T	S		S				S		T	T	T	T	G	G	G		S						S	.	.	.	.
Template Predicted Secondary structure								.																.																							.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	.	.	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G
Query Conservation																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.	.											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	I	K	K	T	I	D	F	I	K	I	L	A	D	L	D	L	K	E	D	V	I	I	T	D	A	G	S	.	.	.	T	K	Y	E	I	V	R	A	A	E	Y	Y	L	K	D	K	P	V	Q	F	V	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.														T	S				T	T								S	.	.	.														T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
														72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions