Job Description P61889 Confidence 97.66% Date Thu Jan 5 12:07:26 GMT 2012 Rank 149 Aligned Residues 129 % Identity 19% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V	A
Query Conservation
Alig confidence																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	.	.	D	H	H	I	F	E	V	H	R	Q	T	K	E	E	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	L	L	K	A	D	F	I	V	H	L	A	G	V	F
Template Known Secondary structure								T	T	T	S															.	.									T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	T	T	L	D	I	I	R	S	N	T	F	V	A	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	.	.	.	.	.	.	.	.	.	.	G	N	V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	Q	A	T	Q	D	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	.	S													T	T		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T	S		S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.											.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	K	G	K	Q	P	G	E	V	E	.	V	P	V	I	G	G	H	S
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		E	Y	G	N	T	V	Y	I	Y	R	W	P	N	L	F	G	K	W	C
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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