Job Description P61889 Confidence 93.39% Date Thu Jan 5 12:07:26 GMT 2012 Rank 405 Aligned Residues 91 % Identity 21% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	.	G	V	A
Query Conservation																																																																														.
Alig confidence								.															.	.																								.	.	.	.	.	.	.	.	.																						.
Template Conservation								.															.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		V	L	G	A	V	G	.	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	.	.	G	L	G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	G	.	.	.	.	.	.	.	.	.	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K
Template Known Secondary structure								.		S													.	.	T	T									S	S											T	.	.	.	.	.	.	.	.	.					S	S									S									S	G
Template Predicted Secondary structure								.															.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	H	H	L	I	D	E	A	F	F	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	P	G	S	R	I	V	N	T	A
Template Known Secondary structure		G	G	T	T		B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.															.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions