Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 32 Aligned Residues 284 % Identity 25% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V	A
Query Conservation																																					.
Alig confidence								.																.													.																						.																					.	.
Template Conservation								.																.																																			.																					.	.
Template Sequence		K	V	T	V	V	G	.	V	G	M	V	G	M	A	S	A	I	S	I	L	L	K	.	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	.	V	G	D	K	D	Y	S	V	T	A	N	S	K	V	V	V	V	T	A	G	.	.
Template Known Secondary structure								.		S													T	.	T			S							S														T	T	G	G	G			S			.				S	S	G	G	G	G	T	T		S								.	.
Template Predicted Secondary structure								.																.																																			.																					.	.
Template SS confidence
		23	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R	S	N	T	F	V	A
Query Conservation																																																																			.
Alig confidence		.	.																																																.	.	.	.													.
Template Conservation		.	.																																																.	.	.	.
Template Sequence		.	.	A	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S	N	P	V	D	I	L	T	Y	V	A	W	.	.	.	.	K	L	S	G	F	P	R	H	R	V	I	G	S	G	T	N	L	D	S	A	R	F	R	H	L	I	G
Template Known Secondary structure		.	.																												T	T							S	S	S										.	.	.	.		T	T				G	G	G					T	T
Template Predicted Secondary structure		.	.																																																.	.	.	.
Template SS confidence
				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																														.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	.	Q	V	P	G	V	S	.	.	.	.	.	.	.	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M
Query Conservation																														.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.							.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		E	K	L	H	L	H	P	S	S	C	H	A	W	I	V	G	E	H	G	D	S	S	V	P	V	W	S	G	V	N	V	A	G	V	S	L	Q	G	L	N	P	Q	M	G	T	E	G	D	G	E	N	W	K	A	I	H	K	E	V	V	D	G	A	Y	E	V	I	K	L	K	.	.	.	G	Y	T	S	W	A	I
Template Known Secondary structure					T			G	G	G							B	S	S	S	T	T					G	G	G				T	T								T	T	T	T	S	T	T		T	T											T										.	.	.	S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	A	.	.	.	.	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D	I
Query Conservation																																				.	.	.	.
Alig confidence														.	.	.	.																			.	.	.	.																					.
Template Conservation														.	.	.	.																																											.
Template Sequence		G	M	S	V	A	D	L	V	E	S	I	I	.	.	.	.	K	N	M	H	K	V	H	P	V	S	T	L	V	Q	G	M	H	G	V	K	D	E	V	F	L	S	V	P	C	V	L	G	N	S	G	L	T	D	V	I	H	M	.	T	L	K	A	E	E	E	K	Q	L	Q	K	S	A	E	T	L	W	G	V	Q
Template Known Secondary structure														.	.	.	.	T	T												T	T	S	T	T			S	S											T	T									.
Template Predicted Secondary structure														.	.	.	.																																											.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		304
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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