Job Description P61889 Confidence 98.66% Date Thu Jan 5 12:07:26 GMT 2012 Rank 108 Aligned Residues 156 % Identity 17% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.														.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.																			.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																.																			.	.	.
Template Sequence		S	K	V	V	C	V	G	.	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	.	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	.	.	.	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I
Template Known Secondary structure		S							.		S	T	T												.		T	T	S							S								.	.	.		T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S
Template Predicted Secondary structure									.																.																			.	.	.
Template SS confidence
		10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.																		.	.	.	.	.	.	.
Query SS confidence																																																									.																		.	.	.	.	.	.	.
Query Sequence		E	G	A	D	V	V	L	I	S	A	G	V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	.	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	.	.	.	.	.	.	.
Query Conservation																																																									.																		.	.	.	.	.	.	.
Alig confidence																			.																																						.																		.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		A	E	A	D	L	I	F	I	S	V	N	T	P	T	K	M	Y	.	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P
Template Known Secondary structure					S										B		S	S	.	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T
Template Predicted Secondary structure																			.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		E	F	L	A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y
Template Known Secondary structure						T	T								S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions