Job Description P61889 Confidence 92.88% Date Thu Jan 5 12:07:26 GMT 2012 Rank 427 Aligned Residues 72 % Identity 19% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V	A
Query Conservation																																					.
Alig confidence								.																.	.	.											.											.	.	.	.	.	.	.	.	.
Template Conservation								.																.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		S	I	L	V	L	G	.	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	.	.	.	G	A	K	V	F	L	W	N	R	T	K	E	K	A	I	K	L	A	Q	K	F	.	.	.	.	.	.	.	.	.	P	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N	T	T	S	V	G
Template Known Secondary structure								.		S													T	.	.	.	T								S	S											S	.	.	.	.	.	.	.	.	.						S		G	G	G	T	G	G	G		S						S	S	T	T
Template Predicted Secondary structure								.																.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		81	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	G	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	D	E	D	P
Template Known Secondary structure		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions