Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 33 Aligned Residues 293 % Identity 32% Template c2hjrK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of cryptosporidium parvum malate2 dehydrogenase Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																								.
Query SS confidence																																					.																								.
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	.	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	.	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V
Query Conservation																																					.																								.
Alig confidence								.																	.	.											.																								.
Template Conservation								.																	.	.
Template Sequence		K	I	S	I	I	G	.	A	G	Q	I	G	S	T	I	A	L	L	L	G	Q	K	D	.	.	L	G	D	V	Y	M	F	D	I	I	E	G	V	P	Q	G	K	A	L	D	L	N	H	C	M	A	L	I	G	S	P	A	K	I	F	G	E	N	N	Y	E	Y	L	Q	N	S	D	V	V	I	I	T	A	G	V
Template Known Secondary structure								.		S													T	T	.	.		S							S	S	T	T																	T									S		G	G	G	G	T	T		S							S
Template Predicted Secondary structure								.																	.	.
Template SS confidence
		16	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R	S	N	T	F	V
Query Conservation																																																																				.
Alig confidence																																																				.	.	.	.													.
Template Conservation																																																				.	.	.	.
Template Sequence		P	R	K	P	N	M	T	R	S	D	L	L	T	V	N	A	K	I	V	G	S	V	A	E	N	V	G	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	A	M	V	Y	Y	F	K	.	.	.	.	E	K	S	G	I	P	A	N	K	V	C	G	M	S	G	V	L	D	S	A	R	F	R	C	N	L
Template Known Secondary structure					T	T			S	G	G	G																				T	T	S							S	S										.	.	.	.							G	G	G
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.											.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	Q	V	P	G	V	.	.	.	.	.	.	.	.	.	.	S	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																																							.
Template Sequence		S	R	A	L	G	V	K	P	S	D	V	S	A	I	V	V	G	G	H	G	D	E	M	I	P	L	T	S	S	V	T	I	G	G	I	L	L	S	D	F	V	E	Q	G	K	I	T	H	S	Q	I	N	E	I	I	K	K	T	A	F	G	G	G	E	I	V	E	L	L	.	K	T	G	S	A	F	Y	A	P	A
Template Known Secondary structure						T	S		G	G	G							B		S	S	T	T					G	G	G				T	T									T	T	S	S														T										.	S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	.	.	.	A	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D	I	A	L
Query Conservation																																		.	.	.
Alig confidence													.	.	.	.																		.	.	.																						.
Template Conservation													.	.	.	.																																										.
Template Sequence		A	S	A	V	A	M	A	Q	A	Y	L	.	.	.	.	K	D	S	K	S	V	L	V	C	S	T	Y	L	T	G	Q	Y	N	V	N	N	L	F	V	G	V	P	V	V	I	G	K	N	G	I	E	D	V	V	I	V	.	N	L	S	D	D	E	K	S	L	F	S	K	S	V	E	S	I	Q	N	L	V	Q	D
Template Known Secondary structure													.	.	.	.	T	T													S	G	G	G														T	T									.
Template Predicted Secondary structure													.	.	.	.																																										.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		306	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		323	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions