Job Description P61889 Confidence 94.08% Date Thu Jan 5 12:07:26 GMT 2012 Rank 368 Aligned Residues 87 % Identity 15% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	.	E	G	A	D	V	V	L	I	S	A	G	V	A
Query Conservation																																																																				.
Alig confidence								.																		.																	.	.	.	.	.	.	.	.																		.										.	.	.	.
Template Conservation								.																		.																	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		G	L	C	I	V	G	.	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	.	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	.	.	.	.	.	.	.	.	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	.	.	.	.
Template Known Secondary structure								.		S										S				S	S	.									S		T	T	T	T	T		.	.	.	.	.	.	.	.			T	T						G	G	G					S	T	T	T								.	.	.	.
Template Predicted Secondary structure								.																		.																	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		82	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	P	R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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