Return to main results Retrieve Phyre Job Id

Job DescriptionP61889
Confidence90.53%DateThu Jan 5 12:07:26 GMT 2012
Rank484Aligned Residues111
% Identity14%Templatec2c20D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARK
Query Conservation 
 


  
 

   
  
        

 
 
          

                    
  








    
Alig confidence 




















...


















..


































Template Conservation 










  

  

  ...
  
    
          ..  
     

 
   
                   
Template Sequence  ILICGGAGYIGSHAVKKLVDE. . . GLSVVVVDNLQTGHEDAIT. . EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS
Template Known Secondary structure  TTTST...T



SSS
GGGS
..SSS

TT
TS





Template Predicted Secondary structure 




...








..

















Template SS confidence 















































































   4.....10.........20.... .....30.........40... ......50.........60.........70........
 
   83.. ....90.........100.........110........
Predicted Secondary structure 


....




Query SS confidence 


. . . .
































Query Sequence  PGM. . . . DRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT
Query Conservation     .... 
   
  
  
   
   
    
  
 



Alig confidence 


....
































Template Conservation                                        
 
Template Sequence  LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST
Template Known Secondary structure 

T



Template Predicted Secondary structure 




























Template SS confidence 







































   7980.........90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions