Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 19 Aligned Residues 279 % Identity 25% Template c1y6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: l-lactate dehydrogenase from clostridium thermocellum cth-1135 Resolution 3.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L	I	S	A	G	V	A	R
Query Conservation
Alig confidence								.																.													.	.																	.	.	.																						.	.	.
Template Conservation								.																.													.	.																	.	.	.																						.	.	.
Template Sequence		K	V	A	I	I	G	.	A	G	F	V	G	A	S	A	A	F	T	M	A	L	R	.	Q	T	A	N	E	L	V	L	I	D	V	F	.	.	A	I	G	E	A	M	D	I	N	H	G	L	P	F	M	G	.	.	.	Q	M	S	L	Y	D	Y	S	D	V	K	D	C	D	V	I	V	V	T	A	G	.	.	.
Template Known Secondary structure								.		S													T	.	T		S	S									.	.									T	T	S				T	T	.	.	.							G	G	G	G	T	T		S								.	.	.
Template Predicted Secondary structure								.																.													.	.																	.	.	.																						.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R	S	N	T	F	V	A	E
Query Conservation																																																																		.
Alig confidence		.	.	.																																														.	.	.	.													.
Template Conservation		.	.	.																																														.	.	.	.
Template Sequence		.	.	.	A	T	R	L	D	L	A	K	K	N	V	M	I	A	K	E	V	T	Q	N	I	M	K	Y	Y	N	H	G	V	I	L	V	V	S	N	P	V	D	I	I	T	Y	M	I	Q	.	.	.	.	K	W	S	G	L	P	V	G	K	V	I	G	S	G	T	V	L	D	S	I	R	F	R	Y	L	L	S	E
Template Known Secondary structure		.	.	.																											S							S	S	S										.	.	.	.				T			T	T	T					T	T													T
Template Predicted Secondary structure		.	.	.																																														.	.	.	.
Template SS confidence
					84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	.	Q	V	P	G	V	S	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V
Query Conservation																													.
Alig confidence																													.																															.	.	.
Template Conservation																																																												.	.	.
Template Sequence		K	L	G	V	D	V	K	N	V	H	G	Y	I	I	G	E	H	G	D	S	Q	L	P	L	W	S	C	T	H	I	A	G	K	N	I	N	E	Y	D	K	K	K	I	A	E	D	V	K	T	A	G	A	T	I	I	K	N	K	.	.	.	G	A	T	Y	Y	G	I	A	V	S	I	N	T	I	V	E	T	L	L
Template Known Secondary structure		T	T	T			T	T	T							B		S	S	S	S						T	T				T	T	B		S																							T	.	.	.	S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	A	.	.	.	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D	I	A	L
Query Conservation																								.	.	.
Alig confidence		.	.	.	.																			.	.	.																					.
Template Conservation		.	.	.	.																																										.
Template Sequence		.	.	.	.	K	N	Q	N	T	I	R	T	V	G	T	V	I	N	G	M	Y	G	I	E	D	V	A	I	S	L	P	S	I	V	N	S	E	G	V	Q	E	V	L	Q	F	.	N	L	T	P	E	E	E	E	A	L	R	F	S	A	E	Q	V	K	K	V	L	N	E
Template Known Secondary structure		.	.	.	.		T													S	B	T	T	B		S											T	T									.
Template Predicted Secondary structure		.	.	.	.																																										.
Template SS confidence
						251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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