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Job DescriptionP61889
Confidence100.00%DateThu Jan 5 12:07:26 GMT 2012
Rank5Aligned Residues309
% Identity54%Templatec1smkD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:malate dehydrogenase, glyoxysomal; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS. GEDATPALEGADVVLISAGV
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Template Sequence  FKVAILGAAGGIGQPLAMLMKMN. PLVSVLHLYDVVN. APGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV
Template Known Secondary structure  TTTSTTT
.TTSSS.TS
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Query Sequence  ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVA
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Template Sequence  PRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVA
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Query Sequence  ELKGKQPGEVEVPVIGGHSGVTILPLLS. QVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL
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Template Sequence  EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC
Template Known Secondary structure  T

GGG
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   239240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVN
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Template Sequence  LRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR
Template Known Secondary structure  TT
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   283......290.........300.........310.........320.........330.........340.........350.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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