Return to main results Retrieve Phyre Job Id

Job DescriptionP61889
Confidence96.26%DateThu Jan 5 12:07:26 GMT 2012
Rank235Aligned Residues99
% Identity19%Templatec1pjcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVAR
Query Conservation 

 


  
 

   
  
        

 
 
          

                    
  








   
Alig confidence 





.












...





















..
































Template Conservation   
 


. 
 

  

    ... 

  
   
            ..              
       



       
Template Sequence  KVVILG. GGVVGTEAAKMAV. . . GLGAQVQIFDINVERLSYLETL. . FGSRVELLYSNSAEIETAVAEADLLIGAVLVPG
Template Known Secondary structure 
.
S...TT
S
..GGGS

T
S



TT
Template Predicted Secondary structure 
.

...





..
















Template SS confidence 















































































   169170.... .....180....... ..190.........200......... 210.........220.........230.........240..
 
   82.......90.........100.........110........
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT
Query Conservation       
   
  
  
   
   
    
  
 



Alig confidence 








............















Template Conservation     
 

  ............  
  

 
 





Template Sequence  RRAPILVPA. . . . . . . . . . . . SLVEQMRTGSVIVDVA
Template Known Secondary structure  SS



B
............TTS
TT
TT
Template Predicted Secondary structure 







............




Template SS confidence 




































   243......250. ........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions