Return to main results Retrieve Phyre Job Id

Job DescriptionP61889
Confidence97.82%DateThu Jan 5 12:07:26 GMT 2012
Rank134Aligned Residues102
% Identity20%Templatec1m67A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30...... ...40.........50... ......60.........70......
Predicted Secondary structure 










.


....










Query SS confidence 


































.
















. . . .






















Query Sequence  KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA. PVTPGVAVDLSHIPTAV. . . . KIKGFSGEDATPALEGADVVLIS
Query Conservation 

 


  
 

   
  
        

 
 
  .        

       ....             
  






Alig confidence 





.














...









.
















....






















Template Conservation 

 


.

 

   
  

  ...
  
            
                  
    
        
 

  
Template Sequence  KAVVFG. SGAFGTALAMVLSKK. . . CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFV
Template Known Secondary structure 
.
STT...
S
TS
TTTSTT



TTS
TT
SS
Template Predicted Secondary structure 
.


...

























Template SS confidence 















































































   17..20.. .......30....... ..40.........50.........60.........70.........80.........90..
 
   77..80.........90.........100........ .110.........
Predicted Secondary structure 









..




Query SS confidence 































. .










Query Sequence  AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT. . CPKACIGIITN
Query Conservation 

        
   
  
  
   
   
   .. 
  
 




Alig confidence 

............

















..










Template Conservation 
 ............              
          

    
Template Sequence  IP. . . . . . . . . . . . TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTK
Template Known Secondary structure 

............T




Template Predicted Secondary structure 

............







Template SS confidence 












































   93. .....100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions