Job Description P61889 Confidence 100.00% Date Thu Jan 5 12:07:26 GMT 2012 Rank 12 Aligned Residues 295 % Identity 27% Template c1hygA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate/malate dehydrogenase; PDBTitle: crystal structure of mj0490 gene product, the family of2 lactate/malate dehydrogenase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																							.	.	.																							.	.	.
Query SS confidence																																							.	.	.																							.	.	.
Query Sequence		M	K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	.	.	.	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	K	G	F	S	.	.	.	G	E	D	A	T	P	A	L	E	G	A	D	V	V	L
Query Conservation																																							.	.	.																							.	.	.
Alig confidence																									.														.	.	.																							.	.	.
Template Conservation																									.
Template Sequence		M	K	V	T	I	I	G	A	S	G	R	V	G	S	A	T	A	L	L	L	A	K	E	.	P	F	M	K	D	L	V	L	I	G	R	E	H	S	I	N	K	L	E	G	L	R	E	D	I	Y	D	A	L	A	G	T	R	S	D	A	N	I	Y	V	E	S	D	E	N	L	R	I	I	D	E	S	D	V	V	I
Template Known Secondary structure								T	T	T	S													S	.	T	T										G	G	G																T	T	S											T	T		G	G	G	G	T	T		S
Template Predicted Secondary structure																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		I	S	A	G	V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	.	V	T	T	L	D	I	I	R
Query Conservation																																																																									.
Alig confidence																																									.																.	.	.	.													.
Template Conservation																																									.																.	.	.	.
Template Sequence		I	T	S	G	V	P	R	K	E	G	M	S	R	M	D	L	A	K	T	N	A	K	I	V	G	K	Y	A	K	K	I	A	E	I	C	D	T	K	I	.	F	V	I	T	N	P	V	D	V	M	T	Y	K	A	L	.	.	.	.	V	D	S	K	F	E	R	N	Q	V	F	G	L	G	T	H	L	D	S	L	R
Template Known Secondary structure										S	S																														.				S	S	S										.	.	.	.				T			T	T	T					T	T
Template Predicted Secondary structure																																									.																.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																				.							.	.	.	.	.	.
Query SS confidence																																				.							.	.	.	.	.	.
Query Sequence		S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L	L	S	.	Q	V	P	G	V	S	.	.	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S
Query Conservation																																				.							.	.	.	.	.	.
Alig confidence																																				.							.	.	.	.	.	.																									.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		F	K	V	A	I	A	K	F	F	G	V	H	I	D	E	V	R	T	R	I	I	G	E	H	G	D	S	M	V	P	L	L	S	A	T	S	I	G	G	I	P	I	Q	K	F	E	R	F	K	E	L	P	I	D	E	I	I	E	D	V	K	T	K	G	E	Q	I	I	R	L	K	.	.	.	G	G	S	E	F	G
Template Known Secondary structure											T			G	G	G							B		S	S	T	T					G	G	G				T	T			G	G	G		G	G	G	G	G												T		T					T	T	S	.	.	.	S	S		S
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C	A	Y	V	E	G	D	G	Q	Y	.	.	.	.	A	R	F	F	S	Q	P	L	L	L	G	K	N	G	V	E	E	R	K	S	I	G	T	L	S	A	F	E	Q	N	A	L	E	G	M	L	D	T	L	K	K	D
Query Conservation																																				.	.	.	.
Alig confidence															.	.	.	.																		.	.	.	.																						.
Template Conservation															.	.	.	.																																											.
Template Sequence		P	A	A	A	I	L	N	V	V	R	C	I	V	.	.	.	.	N	N	E	K	R	L	L	T	L	S	A	Y	V	D	G	E	F	D	G	I	R	D	V	C	I	G	V	P	V	K	I	G	R	D	G	I	E	E	V	V	S	I	.	E	L	D	K	D	E	I	I	A	F	R	K	S	A	E	I	I	K	K	Y
Template Known Secondary structure															.	.	.	.	T	T			B									S	S	S	B	T	T	B		S											T	T									.
Template Predicted Secondary structure															.	.	.	.																																											.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		303	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	G	E	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	E	E	V	K	N	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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