Return to main results Retrieve Phyre Job Id

Job DescriptionP61889
Confidence93.99%DateThu Jan 5 12:07:26 GMT 2012
Rank373Aligned Residues151
% Identity15%Templatec1cf2Q_
PDB info PDB header:oxidoreductaseChain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60. ........70.
Predicted Secondary structure 

















..........





Query SS confidence 



























































. . . . . . . . . .









Query Sequence  KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE. . . . . . . . . . DATPALEGAD
Query Conservation 

 


  
 

   
  
        

 
 
          

               ..........     
  

Alig confidence 





.














.




































..........









Template Conservation 





.





 
 
 
   .





 
            
     
 
             
 
          

Template Sequence  AVAING. YGTVGKRVADAIAQQ. DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEAD
Template Known Secondary structure 
.
STTS.TTSS
STT

SSGGGTT



T
S
Template Predicted Secondary structure 
.


.































Template SS confidence 















































































   3..... .10.........20... ......30.........40.........50.........60.........70.........80
 
   72.......80.........90.........100.........110.........120.........130.........140..... . ..
Predicted Secondary structure 




















...
Query SS confidence 









































































. .
.

Query Sequence  VVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG. . V. TT
Query Conservation 






        
   
  
  
   
   
    
  
 







  
       
         
 
.. .
 
Alig confidence 










................










..

































..
.

Template Conservation 






   
................ 
     
  
.. 


  

          
  

        



 



Template Sequence  IVIDCTPEGIG. . . . . . . . . . . . . . . . AKNLKMYKEKG. . IKAIFQGGEKHEDIGLSFNSLSNYEESYGKDYTRVVSCNT
Template Known Secondary structure 


TT................T..

TTS
S

GGGGTT
S

Template Predicted Secondary structure 






................

..























Template SS confidence 















































































   81........90. ........100.. .......110.........120.........130.........140..
 
   149150.........160.........170..
Predicted Secondary structure 


Query SS confidence 























Query Sequence  LDIIRSNTFVAELKGKQPGEVEVP
Query Conservation 


 
    

  
 
    
   
Alig confidence 























Template Conservation    
   
  
    

    


 
Template Sequence  TGLCRTLKPLHDSFGIKKVRAVIV
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 























   143......150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions