|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | F | R | V | Q | G | P | T | K | L | Q | G | E | V | T | I | S | G | A | K | N | A | A | L | P | I | L | F | A | A | L | L | A | E | E | P | V | E | I | Q | N | V | P | K | L | K | D | V | D | T | S | M | K | L | L | S | Q | L | G | A | K | V | E | R | N | G | S | . |
V | H | I | D | A | R | D | V | N | V | F |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | P | A | T | A | R | K | S | S | G | L | S | G | T | V | R | I | P | G | D | K | S | I | S | H | R | S | F | M | F | G | G | L | A | S | G | E | T | R | I | T | G | L | L | E | G | E | D | V | I | N | T | G | K | A | M | Q | A | M | G | A | R | I | R | K | E | G | D | T | W | I | I | D | G | V | G | N | G | G | L |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| S |
|
|  |  |  |  |  |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | |
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
C | A | P | Y | . |
. |
D | L | V | K | T | M | R | A | S | I | W | A | L | G | P | L | V | A | R | F | G | Q | G | Q | V | S | L | P | G | G | C | T | I | G | A | R | P | V | D | L | H | I | S | G | L | E | Q | L | G | A | T | I | K | L | E | E | G | . |
Y | V | K | A | S | V | D | G | R | . |
. |
L | K | G | A | H |
Query Conservation |   |
  |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
| . |   |   |
|   |   |
|   |
|   | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | P | E | A | P | L | D | F | G | N | A | G | T | G | C | R | L | T | M | G | L | V | G | V | Y | D | . |
F | D | S | T | F | I | G | D | A | S | L | T | K | R | P | M | G | R | V | L | N | P | L | R | E | M | G | V | Q | V | K | S | E | D | G | D | R | L | P | V | T | L | R | G | P | K | T | P | T | P | I | T |
Template Known Secondary structure |   |
|
|
| S | S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | . | S |  |  |  |  |  |
|
| T | T | G | G | G | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|
| S | S |
|
|
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | M | D | K | V | S | V | G | A | T | V | T | I | M | C | A | A | T | L | A | E | G | T | T | I | I | E | N | A | A | R | E | P | E | I | V | D | T | A | N | F | L | I | T | L | G | A | K | I | S | G | Q | G | T | . |
. |
. |
. |
D | R | I | V | I | E | G | V | E | R | L | G | G | G | V | Y | R | V | L | P | D |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   | . | . |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
Y | R | V | P | M | A | S | A | Q | V | K | S | A | V | L | L | A | G | L | N | T | P | G | I | T | T | V | I | E | P | I | M | T | R | . |
. |
D | H | T | E | K | M | L | Q | G | F | G | A | N | L | T | V | E | T | D | A | D | G | V | R | T | I | R | L | E | G | R | G | K | L | T | G | Q | V | I | D | V | P | G | D |
Template Known Secondary structure |   |
 |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  | S | S |
|
|
| . | . |
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | T | T |
|
|
| B |
|
|  |  |  |
|
| B |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | E | T | G | T | F | L | V | A | A | A | I | S | . |
R | G | K | I | I | C | R | N | A | Q | P | D | T | L | D | A | . |
V | L | A | K | L | R | D | A | G | A | D | I | E | V | G | E | D | W | I | S | . |
. |
. |
. |
. |
. |
. |
L | D | M | H | G | K | R | P | K | A | V | N | V | R | T | A | P | H | P | A | F |
Query Conservation |   |
  |
|   |
|
|   |   |   |
|
|
|   |
|   | . |
|   |   |
|   |
|   |
|   |   |   |   |
|   |
|   | . |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |
|
|
|
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
P | S | S | T | A | F | P | L | V | A | A | L | L | V | P | G | S | D | V | T | I | L | N | V | L | M | N | P | T | R | T | G | L | I | L | T | L | Q | E | M | G | A | D | I | E | V | I | N | P | R | L | A | G | G | E | D | V | A | D | L | R | V | R | S | S | T | L | K | G | V | T | V | P | E | D | R | A | P | S | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
|
|
| B |
|
|  |  |
| G | G | G | G | G | G | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
  |
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 360 | . | . | . | . | . | . | . | |
. | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
| . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
P | T | D | M | Q | A | Q | F | T | L | L | N | L | V | A | E | G | T | G | F | I | T | E | . |
. |
. |
. |
. |
. |
T | V | F | E | N | R | F | M | H | V | P | E | L | S | R | M | G | A | H | A | E | I | E | S | N | T | V | I | C | H | G | V | . |
. |
. |
. |
. |
. |
E | K | L | S | G | A | Q | V | M | A | . |
T | D |
Query Conservation |   |
  |   |
|   |   |
|   |
|
|   |
|
|   |   |
|   |
|   |
|   |
|   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   | . |   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
. |   |
|   |   |
|   |
|
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
Template Sequence |   |
. |
I | D | E | Y | P | I | L | A | V | A | A | A | F | A | E | G | A | T | V | M | N | G | L | E | E | L | R | V | K | E | S | D | R | L | S | A | V | A | N | G | L | K | L | N | G | V | D | C | D | E | G | E | T | S | L | V | V | R | G | R | P | D | G | K | G | L | G | N | A | S | G | A | A | V | A | T | H | L | D |
Template Known Secondary structure |   |
. | G | G | G |  |  |  |  |  |  |  |  | T | T | S | B | S |  |  |  |  |
|
|
| G | G | G | G | G | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| S | S |
|  |  |  |  |
|
| T | T |
| T | T |
| S |
| T | T |
|
|  |  |
|
| T | T |
|
Template Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
325 | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |
  |
  |   |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | A | S | A | S | L | V | L | A | G | C | I | A | E | G | T | T | V | V | D | R | I | Y | H | I | D | R | G | Y | E | R | I | E | D | K | L | R | A | L | G | A | N | I | E | R | V |
Query Conservation |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |   |
Template Sequence |   |
H | R | I | A | M | S | F | L | V | M | G | L | V | S | E | N | P | V | T | V | D | D | A | T | M | I | A | T | S | F | P | E | F | M | D | L | M | A | G | L | G | A | K | I | E | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
|  |  |  | S |
|
| T | T | G | G | G | T |
| T | T |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 |
  |