Return to main results Retrieve Phyre Job Id

Job DescriptionP62615
Confidence100.00%DateThu Jan 5 12:07:40 GMT 2012
Rank4Aligned Residues163
% Identity97%Templated1oj4a1
SCOP infoRibosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like GHMP Kinase, N-terminal domain
Resolution2.01

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAAD
Query Conservation 
     








 
 
   



   

  



 
 
 
       
 
           


  
          
Alig confidence 















































































Template Conservation        






 
 
     



   

  



 
 
 
       
             

  

          
Template Sequence  XRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLXKTAAD
Template Known Secondary structure 

TTS
SSS

S
BTTB
GGGS
Template Predicted Secondary structure 


































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  SGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
Query Conservation          
  
 
   

   






 
 
 
 

       
   

   
   
 

     

     
 
  
Alig confidence 















































































Template Conservation             
 
 
 

 








  

 
 


   
  

  

   
  






 
    
   
 

  
Template Sequence  SGRLPTGSGANISIDKRLPXGGGLGGGSSNAATVLVALNHLWQCGLSXDELAEXGLTLGADVPVFVRGHAAFAEGVGEIL
Template Known Secondary structure  TT
S
TT


S
SSTTS
T



GGG
TT
S
TTTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  TPV
Query Conservation     
Alig confidence 


Template Conservation   
 
Template Sequence  TPV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   161..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions