Return to main results Retrieve Phyre Job Id

Job DescriptionP62615
Confidence4.50%DateThu Jan 5 12:07:40 GMT 2012
Rank74Aligned Residues43
% Identity9%Templatec3s6eB_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:rna-binding protein 39; PDBTitle: crystal structure of a rna binding motif protein 39 (rbm39) from mus2 musculus at 0.95 a resolution
Resolution0.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   223......230.... .... .240.........250.........260.....
Predicted Secondary structure 


.....








Query SS confidence 











. . .



. .


























Query Sequence  DAVLSWLLEYAP. . . SRLT. . GTGACVFAEFDTESEARQVLEQAPEWL
Query Conservation    
   
   

...
 

..


 

 

      
  
   
    
Alig confidence 











...



..


























Template Conservation   

       
 
  
 
      
 


 
   
 
  
   
 

 
Template Sequence  DDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRW
Template Known Secondary structure  TTTT

S
TT
SS


SSTT
Template Predicted Secondary structure 














Template SS confidence 















































   448.450.........460.........470.........480.........490.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions