Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 16 Aligned Residues 256 % Identity 16% Template c3ltoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mevalonate diphosphate decarboxylase; PDBTitle: crystal structure of a mevalonate diphosphate decarboxylase2 from legionella pneumophila Resolution 2.27 Å

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		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.
Predicted Secondary structure														.												.	.											.																													.	.	.	.	.	.	.
Query SS confidence														.												.	.											.																													.	.	.	.	.	.	.
Query Sequence		Q	W	P	S	P	A	K	L	N	L	F	L	.	Y	I	T	G	Q	R	A	D	G	Y	H	.	.	T	L	Q	T	L	F	Q	F	L	D	.	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	.	.	.	.	.	.	.	N	L	I	V	R	A	A	R
Query Conservation														.												.	.											.																													.	.	.	.	.	.	.
Alig confidence														.												.	.											.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	W	F	A	Q	A	P	A	N	I	A	L	I	K	Y	X	G	K	K	D	E	N	S	N	L	P	D	N	S	S	L	S	Y	T	L	S	N	L	L	S	S	V	K	L	E	K	L	P	T	K	K	D	I	W	E	P	L	T	I	P	G	A	P	E	F	N	L	S	V	E	A	Q	K	R	F	I	D	H	L	V
Template Known Secondary structure																	T	T		B		T	T	T			B	S	S																				S	S	S	S						B		T	T	S		B						S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		L	L	M	K	T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	.	.	.	.	.	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R
Query Conservation																																																						.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		R	L	K	E	Y	F	G	.	.	.	.	.	.	Y	V	G	G	F	L	I	Q	S	S	N	N	F	P	H	S	S	G	L	A	S	S	A	S	S	F	A	A	L	T	K	C	A	S	I	A	L	S	E	L	T	Q	K	P	L	P	S	I	D	E	Q	A	Q	L	S	R	L	G	S	G	S	S	C	R	S	F	Y
Template Known Secondary structure							T	T	.	.	.	.	.	.												S	S			S	S	S																								T																		G	G	G	G	G	G	G	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.														.	.	.	.	.	.
Query SS confidence																																	.	.	.														.	.	.	.	.	.
Query Sequence		G	H	A	A	F	A	E	G	V	G	E	I	L	T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	.	.	.	I	P	T	P	V	I	F	K	D	P	E	L	P	.	.	.	.	.	.	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R
Query Conservation																																	.	.	.														.	.	.	.	.	.
Alig confidence																																	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	W	A	L	W	T	G	D	K	V	S	A	I	D	L	P	Y	K	D	L	L	H	Q	V	I	V	I	S	S	Q	E	K	E	I	P	S	R	V	A	H	K	L	V	K	T	S	P	F	Y	E	T	R	S	E	R	A	E	A	N	L	K	L	L	L	N	A	F	E	N	K	D	W	T	S	I	Y	Q	I	C
Template Known Secondary structure			S						T	T								S			S												T	T											G	G	G	S	T	T	T	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		219	220	.																										.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		F	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	V	L	S	W	L	L	E	Y	A	P	.	.	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	N
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																.
Template Conservation																																																												.
Template Sequence		W	H	E	F	L	D	X	H	Q	L	F	K	T	C	E	K	P	F	S	Y	I	T	D	N	T	L	H	I	L	S	V	I	E	K	F	W	N	E	K	G	D	G	P	V	V	T	X	D	A	G	P	N	V	H	L	L	Y	R	.	S	D	Q	T	D	L	A	R	Q	F	K	S	D	H	L	V
Template Known Secondary structure														T	S	S	S				S																				S									S	S	S								.	G	G	G												T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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