Job Description P62615 Confidence 99.08% Date Thu Jan 5 12:07:40 GMT 2012 Rank 37 Aligned Residues 247 % Identity 15% Template c3f0nB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mevalonate pyrophosphate decarboxylase; PDBTitle: mus musculus mevalonate pyrophosphate decarboxylase Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure													.	.																	.	.	.							.	.	.														.
Query SS confidence													.	.																	.	.	.							.	.	.														.
Query Sequence		T	Q	W	P	S	P	A	K	L	N	L	.	.	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	.	.	.	T	L	F	Q	F	L	.	.	.	D	Y	G	D	T	I	S	I	E	L	R	D	D	.	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L
Query Conservation													.	.																	.	.	.							.	.	.														.
Alig confidence													.	.		.	.	.							.						.	.	.							.	.	.														.
Template Conservation																.	.	.							.
Template Sequence		V	T	C	T	A	P	V	N	I	A	V	I	K	Y	.	.	.	W	G	K	R	D	E	.	A	L	I	L	P	I	N	S	S	L	S	V	T	L	H	Q	D	Q	L	K	T	T	T	T	V	A	I	S	K	D	F	T	E	D	R	I	W	L	N	G	R	E	E	D	V	G	Q	P	R	L	Q	A	C	L	R	E
Template Known Secondary structure																.	.	.						T	.	T	T	T			S	S							B		T	T	T	S										S	S			S						T	T					T	T
Template Predicted Secondary structure																.	.	.							.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	M	K	T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	.	F
Query Conservation																																																																																.
Alig confidence										.																			.	.	.	.	.																																			.	.	.										.
Template Conservation										.																			.	.	.	.	.																																			.	.	.
Template Sequence		I	R	R	L	A	R	K	R	.	R	L	S	L	S	Y	K	V	H	V	A	S	V	N	N	F	P	A	.	.	.	.	.	S	S	A	A	G	Y	A	C	L	A	Y	T	L	A	Q	V	Y	G	V	E	G	D	L	S	E	V	A	R	R	G	S	G	S	A	.	.	.	C	R	S	L	Y	G	G	F	V	E	W
Template Known Secondary structure										.			G	G	G														.	.	.	.	.																		T			S											G	G	G	.	.	.	G	G	G	G	S	S	S
Template Predicted Secondary structure										.																			.	.	.	.	.																																			.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.
		153	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.														.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	G	V	G	E	.	.	.	.	.	.	.	.	.	I	L	T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D
Query Conservation								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																											.	.
Template Sequence		Q	M	G	E	Q	A	D	G	K	D	S	I	A	R	Q	I	A	P	E	W	H	W	P	Q	L	R	I	L	I	L	V	V	S	A	D	K	K	Q	T	G	S	T	V	G	M	Q	T	S	V	E	T	S	T	L	L	K	F	.	.	R	A	E	S	V	V	P	E	R	M	K	E	M	T	R	C	I	Q	E	Q	D
Template Known Secondary structure					S		T	T		T	T									T	T	S		T	T															S																			.	.					T														T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.																						220	.	.	.	.	.	.	.	.	.						230	.	.	.		.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.					.						.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.					.						.
Query Sequence		C	E	V	I	A	R	K	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	V	D	A	V	L	S	W	L	.	.	.	.	.	L	E	Y	A	.	P	S	R	L	T	.	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.					.						.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.					.						.												.
Template Conservation																																																																					.
Template Sequence		F	Q	G	F	A	Q	L	T	M	K	D	S	N	Q	F	H	A	T	C	L	D	T	F	P	P	I	S	Y	L	N	D	T	S	R	R	I	I	Q	L	V	H	R	F	N	T	H	H	G	Q	T	K	V	A	Y	T	F	D	A	G	P	N	A	V	I	F	T	L	.	E	D	T	V	A	E	F	V	A	A	V	R
Template Known Secondary structure																						T	S	S	S																								T	S									S	S	S								.	G	G	G
Template Predicted Secondary structure																																																																					.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.
		263	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	F
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		328	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions