Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 3 Aligned Residues 257 % Identity 30% Template c2v34B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-diphosphocytidyl-2c-methyl-d-erythritol kinase; PDBTitle: ispe in complex with cytidine and ligand Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L	L	M	K	T	A	A	D	S	G
Query Conservation
Alig confidence																																																				.	.	.	.																									.	.
Template Conservation																																																				.	.	.	.																									.	.
Template Sequence		I	K	V	L	S	P	A	K	I	N	L	G	L	W	V	L	G	R	L	P	S	G	Y	H	E	I	L	T	L	Y	Q	E	I	P	F	Y	D	E	I	Y	I	R	E	G	V	L	R	V	E	T	.	.	.	.	N	I	G	I	P	Q	E	E	N	L	V	Y	K	G	L	R	E	F	E	R	I	T	G	I	.	.
Template Known Secondary structure																					T	T	S																						S	S						.	.	.	.	S	S				G	G	G																	.	.
Template Predicted Secondary structure																																																				.	.	.	.																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	F	A	E	G	V	G	E	I	L	T	P
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	I	N	Y	S	I	F	I	Q	K	N	I	P	P	G	A	G	L	G	G	G	S	S	N	L	A	V	V	L	K	K	V	N	E	L	L	G	S	P	L	S	E	E	E	L	R	E	L	V	G	S	I	S	A	D	A	P	F	F	L	L	G	K	S	A	I	G	R	G	K	G	E	V	L	E	P
Template Known Secondary structure		.	.	.	.												S		T	T	S	S	S																		T	T			S														T	T					T	T		S						T	T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure				.																																											.	.	.	.	.	.	.																												.
Query SS confidence				.																																											.	.	.	.	.	.	.																												.
Query Sequence		V	D	.	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	.	.	.	.	.	.	.	F	S	N	D	C	E	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	.
Query Conservation				.																																											.	.	.	.	.	.	.																												.
Alig confidence				.																																											.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		V	E	T	E	I	S	G	K	I	T	L	V	I	P	Q	V	S	S	S	T	G	R	V	Y	S	S	L	R	E	E	H	F	V	T	P	E	Y	A	E	E	K	I	Q	R	I	I	S	G	E	V	E	E	I	E	N	V	L	G	D	I	A	R	E	L	Y	P	E	I	N	E	V	Y	R	F	V	E	Y	L	G	F
Template Known Secondary structure								S								S	S										T			G	G	G																T	T		G	G	G			B																							T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	N	G	F	V	A	K
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		K	P	F	V	S	G	S	G	S	T	V	Y	F	F	G	G	A	S	E	E	L	K	K	A	A	K	.	.	M	R	G	W	K	V	V	E	L	E
Template Known Secondary structure							T	T	S	S					S	S												.	.			T
Template Predicted Secondary structure																												.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions