Job Description P62615 Confidence 99.90% Date Thu Jan 5 12:07:40 GMT 2012 Rank 27 Aligned Residues 255 % Identity 18% Template c2hkeB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative; PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																													.	.	.	.								.	.	.											.														.
Query SS confidence																													.	.	.	.								.	.	.											.														.
Query Sequence		T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	.	.	.	.	T	L	F	Q	F	L	D	.	.	.	Y	G	D	T	I	S	I	E	L	R	.	D	D	G	D	I	R	L	L	T	P	V	E	G	.	V	E	H	E	D	N	L	I	V	R	A	A	R	L
Query Conservation																													.	.	.	.								.	.	.											.														.
Alig confidence													.																.	.	.	.								.	.	.											.														.
Template Conservation													.
Template Sequence		V	T	V	E	A	P	I	N	I	A	F	.	I	K	Y	W	G	K	R	E	G	G	E	T	L	I	L	P	T	N	D	S	F	S	I	T	L	S	A	S	P	F	R	S	K	T	S	V	E	L	R	D	D	I	E	T	D	T	L	R	L	N	G	T	E	V	D	V	G	K	T	P	R	V	Q	S	M	L	L	H
Template Known Secondary structure													.						B		T	T		T	T	T	T		B	S	S							B		S	S	S	S										S	S		S	S						T	T					G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	M	K	T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	.	F
Query Conservation																																																																																.
Alig confidence											.	.	.																																																							.	.	.										.
Template Conservation											.	.	.																																																							.	.	.
Template Sequence		L	R	S	T	C	P	E	E	L	.	.	.	K	N	K	K	V	N	I	V	S	E	N	N	F	P	T	A	A	G	M	A	S	S	A	S	G	Y	C	A	M	S	A	A	L	I	R	A	F	K	S	T	T	N	V	S	M	L	A	R	L	G	S	G	S	A	.	.	.	C	R	S	A	F	G	G	F	V	I	W
Template Known Secondary structure				T	T	S		T	T	T	.	.	.	T	T	S												T	T	S																				T	T			S											G	G	G	.	.	.	G	G	T	T	S	S	S
Template Predicted Secondary structure											.	.	.																																																							.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		A	E	G	V	G	E	.	.	.	.	.	.	.	.	.	I	L	T	P	V	D	P	P	E	K	W	Y	L	V	A	H	.	.	.	.	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	.	.	.	.	.	.	.	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E
Query Conservation								.	.	.	.	.	.	.	.	.																	.	.	.	.																.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																	.	.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	G	E	K	P	D	G	S	D	C	V	A	T	Q	F	V	D	E	T	H	W	P	E	I	Q	V	M	C	A	V	L	K	G	A	Q	K	D	V	S	S	T	K	G	M	Q	Q	S	L	K	T	S	P	L	M	K	K	R	I	S	E	T	V	P	E	R	M	K	I	A	S	R	A	I	K	A	R	D	F	A
Template Known Secondary structure					S		T	T	S	T	T									T	T	S		T	T												S																	T	T							T																T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
																														213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation																																																																			.
Template Sequence		T	F	A	E	I	A	M	L	E	S	D	D	L	Q	E	I	C	A	T	T	E	P	K	I	T	Y	A	T	E	D	S	Y	A	M	I	R	L	V	K	A	Y	N	A	K	K	G	R	T	A	L	A	Y	T	F	D	A	G	A	N	C	F	L	F	V	L	.	K	E	D	L	P	E	A	V	A	M	L	M	E	H
Template Known Secondary structure																				T	S	S	S																								T	S									S	S	S								.	G	G	G
Template Predicted Secondary structure																																																																			.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.
		265
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		318

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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