Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 12 Aligned Residues 268 % Identity 15% Template c2hk3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:diphosphomevalonate decarboxylase; PDBTitle: crystal structure of mevalonate diphosphate decarboxylase2 from staphylococcus aureus (orthorhombic form) Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																														.	.							.														.														.
Query SS confidence																														.	.							.														.														.
Query Sequence		R	T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	.	.	T	L	F	Q	F	L	.	D	Y	G	D	T	I	S	I	E	L	R	D	D	.	G	D	I	R	L	L	T	P	V	E	G	V	E	.	H	E	D	N	L	I	V	R	A	A	R	L	L	M	K
Query Conservation																														.	.							.														.														.
Alig confidence														.																.	.							.														.														.
Template Conservation														.
Template Sequence		S	G	K	A	R	A	H	T	N	I	A	L	.	I	K	Y	W	G	K	K	D	E	A	L	I	I	P	M	N	N	S	I	S	V	T	L	E	K	F	Y	T	E	T	K	V	T	F	N	D	Q	L	T	Q	D	Q	F	W	L	N	G	E	K	V	S	G	K	E	L	E	K	I	S	K	Y	M	D	I	V	R	N
Template Known Secondary structure														.									T	T	T	T			S	S																				T	T		S	S						T	T					T
Template Predicted Secondary structure														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	F	A	E	.	.
Query Conservation																																																																																.	.
Alig confidence							.	.	.	.	.	.																																																																				.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		R	A	G	I	D	.	.	.	.	.	.	W	Y	A	E	I	E	S	D	N	F	V	P	T	A	A	G	L	A	S	S	A	S	A	Y	A	A	L	A	A	A	C	N	Q	A	L	D	M	Q	L	S	D	K	D	L	S	R	L	A	R	I	G	S	G	S	A	S	R	S	I	Y	G	G	F	A	E	W	E	K	G
Template Known Secondary structure				T			.	.	.	.	.	.											S		T	T	T	T																			T	T														T	T		T	G	G	G	G	G	G	S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
							155	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.											.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.											.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	G	V	G	E	I	L	T	P	V	D	.	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	.	.	.	.	.	.	.	.	.	.	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R
Query Conservation		.	.	.	.	.											.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.											.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	D	E	T	S	Y	A	V	P	L	E	S	N	H	F	E	D	D	L	A	M	I	F	V	V	I	N	Q	H	S	K	K	V	P	S	R	Y	G	M	S	L	T	R	N	T	S	R	F	Y	Q	Y	W	L	D	H	I	D	E	D	L	A	E	A	K	A	A	I	Q	D	K	D	F	K	R	L	G	E	V	I
Template Known Secondary structure		S	S	T	T	T									T	T	G	G	G	G											S	S																	T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																										219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	.	.	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	.	.	.	N	G	F	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																		.														.	.	.
Template Conservation																																																													.
Template Sequence		E	E	N	G	L	R	M	H	A	T	N	L	G	S	T	P	P	F	T	Y	L	V	Q	E	S	Y	D	V	M	A	L	V	H	E	C	R	E	A	G	Y	P	C	Y	F	T	M	D	A	G	P	N	V	K	I	L	V	E	K	K	.	N	K	Q	Q	I	I	D	K	L	L	T	Q	F	D	N	N	Q	I	I	D
Template Known Secondary structure													T	T	S	S	S				S																		T	T									S	S	S								G	G	.	G										T	T	S		G	G	G
Template Predicted Secondary structure																																																													.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	A	N	L	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	I	I	A	T	G	I
Template Known Secondary structure				B			S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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