Job Description P62615 Confidence 99.97% Date Thu Jan 5 12:07:40 GMT 2012 Rank 23 Aligned Residues 256 % Identity 23% Template c2aj4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:galactokinase; PDBTitle: crystal structure of saccharomyces cerevisiae galactokinase2 in complex with galactose and mg:amppnp Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.						.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.						.
Template Sequence		A	R	S	P	G	R	V	N	L	I	.	.	.	.	G	E	H	I	D	.	Y	C	D	F	S	V	L	P	L	A	I	D	F	D	M	L	C	A	V	K	V	L	N	E	K	N	P	S	I	T	L	I	N	A	D	P	K	F	A	Q	R	K	F	D	L	P	L	D	G	S	Y	V	T	I	D	P	S	V	S	D
Template Known Secondary structure												.	.	.	.		T	T		G	.	G	G	T			B																			S	S								S	S	T	T	S									T	T								T	T	S
Template Predicted Secondary structure												.	.	.	.						.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.					.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
										67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	V	R	A	A	R	L	L	M	K	T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	.	.	.	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G
Query Conservation		.	.	.	.	.	.	.	.																																																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																					.	.	.
Template Conservation
Template Sequence		W	S	N	Y	F	K	C	G	L	H	V	A	H	S	F	L	K	K	L	A	P	E	R	F	A	S	A	P	L	A	G	L	Q	V	F	C	E	G	D	V	P	T	G	S	G	L	S	S	S	A	A	F	I	C	A	V	A	L	A	V	V	K	A	N	M	G	P	G	Y	H	M	S	K	Q	N	L	M	R	I	T
Template Known Secondary structure																										S	S	S													S		T	T	S	S	S																					T	T				B
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		136	.										.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.											.	.	.										.											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.											.	.	.										.											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	.	.	.	.	.	.	.	.	.	L	G	A	D	V	P	V	F	V	R	.	.	.	G	H	A	A	F	A	E	G	V	.	G	E	I	L	T	P	V	D	P	P	.	.	.	.	.	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.											.	.	.										.											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.											.	.	.										.											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	E	H	Y	V	G	V	N	N	G	G	M	D	Q	A	A	S	V	C	G	E	E	D	H	A	L	Y	V	E	F	K	P	Q	L	K	A	T	P	F	K	F	P	Q	L	K	N	H	E	I	S	F	V	I	A	N	T	L	V	V	S	N	K	F	E	T	A	P	T	N	Y	N	L	R	V	V	E	V	T
Template Known Secondary structure		T	T	G	G	G	G	G	T					S										B	T	T	B							S	S	S												S	S																T	T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	A	N	V	L	A	A	T	Y	G	V	V	L	L	N	K	G	N	L	R	D	F	M	N	V	Y	Y	A	R	Y	H	N	I	S	T	P	W	N	G	D	I	E	S	G	I	E	R	L	T	K	M	L	V	L	V	E	E	S	L	A	N	K	K	Q	G	F	S	V	D	D	V	A	Q	S	L	N	C	S	R
Template Known Secondary structure												T																				T	S				S																								T	G	G	G	T	T		B										T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
																						185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.												.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	.	.	.	.	.	.	.	.	.	.	.	C	E	F	S	N	D	C	E	V	I	A	R	K	R	F	.	.	.	.	R	E	V	D	A	V	L	S	W	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		E	E	F	T	R	D	Y	L	T	T	S	P	V	R	F	Q	V	L	K	L	Y	Q	R	A	K	H	V	Y	S	E	S	L	R	V	L	K	A	V	K	L	M	T	T	D	E	D	F	F	K	Q	F	G	A	L	M	N	E	S	Q	A	S	C	D	K	L	Y	E	C	S	C	P	E	I	D	K	I	C	S	I	A
Template Known Secondary structure										S	S	S					S		B																																															T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		230	.	.	.	.			.	.	.	.	.	240			.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure							.	.							.	.										.	.
Query SS confidence							.	.							.	.										.	.
Query Sequence		L	E	Y	A	P	.	.	S	R	L	T	G	T	.	.	G	A	C	V	F	A	E	F	D	.	.	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L
Query Conservation							.	.							.	.										.	.
Alig confidence							.	.							.	.										.	.
Template Conservation
Template Sequence		L	S	N	G	S	Y	G	S	R	L	T	G	A	G	W	G	G	C	T	V	H	L	V	P	G	G	P	N	G	N	I	E	K	V	K	E	A	L	A	N	E	F
Template Known Secondary structure			T	T	T		S						T	T		S	S	S									S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions