Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 2 Aligned Residues 255 % Identity 36% Template c1uekA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol PDBTitle: crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-2 erythritol kinase Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L	L	M	K	T	A	A	D	S	G
Query Conservation
Alig confidence																																																	.						.	.	.	.																							.
Template Conservation																																																	.						.	.	.	.																							.
Template Sequence		M	E	R	L	A	P	A	K	V	N	L	G	L	S	V	R	F	R	R	E	D	G	Y	H	E	L	H	T	L	F	A	P	F	S	L	A	D	R	L	V	V	E	P	V	S	S	G	.	L	H	F	Q	G	.	.	.	.	P	Y	G	R	E	N	L	A	Y	R	A	A	S	L	Y	L	E	A	A	G	Q	P	.
Template Known Secondary structure																					T	T	S	S																						S	S		.					S	.	.	.	.	T	T	G	G	G	S													T	T			.
Template Predicted Secondary structure																																																	.						.	.	.	.																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	F	A	E	G	V	G	E	I	L	T	P
Query Conservation
Alig confidence		.	.	.	.	.																																									.	.	.
Template Conservation		.	.	.	.	.																																									.	.	.
Template Sequence		.	.	.	.	.	G	G	V	R	I	L	L	E	K	R	I	P	E	G	A	G	L	G	G	G	S	S	D	A	A	Q	V	L	L	A	L	Q	A	L	Y	P	A	E	V	D	.	.	.	L	F	A	L	A	R	T	L	G	A	D	V	P	F	F	L	L	G	R	G	A	E	A	R	G	V	G	E	R	L	K	P
Template Known Secondary structure		.	.	.	.	.											S		S	S	S	S	S																		S		S				.	.	.										T	T								S						T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.																																									.	.	.
Template SS confidence
							75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.																													.
Query SS confidence																																														.	.	.	.	.	.	.																													.
Query Sequence		V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	.	.	.	.	.	.	.	F	S	N	D	C	E	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	.
Query Conservation																																														.	.	.	.	.	.	.																													.
Alig confidence																																														.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		L	A	L	P	P	V	P	A	V	V	F	F	P	G	L	R	V	P	T	P	L	V	Y	R	A	V	R	P	E	D	F	G	P	D	L	P	V	E	A	I	L	E	A	L	A	R	G	E	E	P	P	Y	W	N	S	L	E	G	P	A	F	R	L	F	P	E	L	K	E	V	R	G	R	M	R	A	L	G	L	R
Template Known Secondary structure																										T			G	G	G																	T				S			B	T	T									T												T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	N	G	F	V	A	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	V	L	M	S	G	S	G	S	A	F	F	G	L	A	E	G	P	D	H	A	R	R	A	A	E	A	L	R	A	W	G	R	A	W	A	G	T
Template Known Secondary structure							T	T	S	S							S	S												T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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