Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 19 Aligned Residues 253 % Identity 20% Template c1pieA_ PDB info PDB header:transferase Chain: A: PDB Molecule:galactokinase; PDBTitle: crystal structure of lactococcus lactis galactokinase2 complexed with galactose Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	.	.	.	.	.	.	.	.	.	.	.	V	E	H	E	D	N	L	I	V	R	A	A	R	L
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.						.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.						.
Template Sequence		F	F	S	P	G	R	I	N	L	I	.	.	.	.	G	E	H	T	D	.	Y	N	G	G	Y	V	F	P	A	S	I	T	I	G	T	T	G	L	A	R	L	R	E	D	K	K	V	K	L	Y	S	E	N	F	P	K	L	G	V	I	E	F	D	L	D	E	V	E	K	K	D	G	E	L	W	S	N	Y	V	K
Template Known Secondary structure												.	.	.	.			S		T	.	T	T	T																				S	S	S							T	T		G	G	G							T	T		T	T	S			T	T		T
Template Predicted Secondary structure												.	.	.	.						.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40					.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.											.	140	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	K	T	A	A	D	S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	.	.	.	.	.	.	.	.	.	.	G	A	D	V	P
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	I	V	M	L	K	G	A	G	Y	E	I	D	K	G	F	E	L	L	I	K	G	E	I	P	T	A	S	G	L	S	S	S	A	S	L	E	L	L	V	G	V	V	L	D	D	L	F	N	L	N	V	P	R	L	E	L	V	Q	L	G	Q	K	T	E	N	D	Y	I	G	V	N	S	G	I	L	D	Q	F
Template Known Secondary structure										T	T					S										S		T	T	S	S	S																		T	T																			T	T						S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		144	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure								.	.	.																.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	V	R	G	H	.	.	.	A	A	F	A	E	G	V	G	E	I	L	T	P	V	D	.	.	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.																.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	G	F	G	E	V	K	K	A	I	E	L	D	C	N	T	L	K	Y	E	M	V	P	V	E	L	R	D	Y	D	I	V	I	M	N	T	N	K	P	R	A	L	T	E	S	K	Y	N	E	R	F	A	E	T	R	E	A	L	K	R	M	Q	T	R	L	D	I	Q	S	L	G	E	L	S	N	E	E	F	D
Template Known Secondary structure							B	T	T							T	T	T											T	T														T	T																									S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
																					182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R	F	.	.	.	.	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	.	.	.	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.									.	.	.	.																.	.	.
Template Conservation																																																	.	.
Template Sequence		A	N	T	D	L	I	G	D	E	T	L	I	K	R	A	R	H	A	V	Y	E	N	N	R	T	K	I	A	Q	K	A	F	V	A	G	N	L	T	K	F	G	E	L	L	N	A	S	.	.	H	A	S	L	K	D	D	Y	E	V	T	G	L	E	L	D	T	L	A	E	T	A	Q	K	Q	A	G	V	L	G	A
Template Known Secondary structure			T	G	G	G	T																													T													.	.							T	S																	S	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		236	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		R	L	T	G	T	G	.	.	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L
Query Conservation								.	.
Alig confidence								.	.									.
Template Conservation																		.
Template Sequence		R	M	T	G	A	G	F	G	G	C	A	I	A	L	V	A	.	H	D	N	V	S	A	F	R	K	A	V	G	Q	V	Y
Template Known Secondary structure					S	S		S	S	S								.	G	G	G
Template Predicted Secondary structure																		.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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