Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 1 Aligned Residues 283 % Identity 98% Template c1oj4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-diphosphocytidyl-2-c-methyl-d-erythritol PDBTitle: ternary complex of2 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase Resolution 2.01 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L	L	M	K	T	A	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L	L	X	K	T	A	A	D
Template Known Secondary structure																							T	T	S																							S	S	S						S		B	T	T	B		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	F	A	E	G	V	G	E	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	X	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	X	D	E	L	A	E	X	G	L	T	L	G	A	D	V	P	V	F	V	R	G	H	A	A	F	A	E	G	V	G	E	I	L
Template Known Secondary structure		T	T		S		T	T											S		S	S	T	T	S																		T	T																	T	T							T	B						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	S	R	L	T	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	E	L	P	R	N	T	P	K	R	S	I	E	T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	S	R	L	T	G	T
Template Known Secondary structure																	S										T		T	T	S															S				B	T	T																				T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	N	G	F	V	A	K	G	A	N	L	S	P	L	H	R	A	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P	E	W	L	N	G	F	V	A	K	G	V	N	L	S	P	L	H	R	A	X	L
Template Known Secondary structure		S	S							S	S											S		G	G	G									S	B						T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions