Job Description P62615 Confidence 100.00% Date Thu Jan 5 12:07:40 GMT 2012 Rank 20 Aligned Residues 262 % Identity 16% Template c1k47F_ PDB info PDB header:transferase Chain: F: PDB Molecule:phosphomevalonate kinase; PDBTitle: crystal structure of the streptococcus pneumoniae2 phosphomevalonate kinase (pmk) Resolution 2.42 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	T	L	F	Q	F	L	D	Y	G	D	T	I	S	I	E	L	R	D	D	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I	V	R	A	A	R	L	L	M	K	T	A	A	D
Query Conservation
Alig confidence																.	.	.	.																																								.	.	.	.	.
Template Conservation																.	.	.	.																																								.	.	.	.	.
Template Sequence		X	X	I	A	V	K	T	C	G	K	L	Y	W	A	.	.	.	.	G	E	Y	A	I	L	E	P	G	Q	L	A	L	I	K	D	I	P	I	Y	X	R	A	E	I	A	F	S	D	S	Y	R	I	Y	S	D	X	N	P	.	.	.	.	.	D	Y	S	L	I	Q	E	T	I	A	L	X	G	D	F	L	A	V
Template Known Secondary structure																.	.	.	.		T	T	G	G	G	S	T	T																				S	S										.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.																																								.	.	.	.	.
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.					.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.						.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		S	G	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	.	.	.	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	.	.	.	.	.	.	.	.	.	G	A	D	V	P	V	F	V	R	G
Query Conservation																								.	.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence						.	.																	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		R	G	Q	N	.	.	L	R	P	F	S	L	A	I	Y	G	K	X	E	R	E	G	K	K	F	G	L	G	S	S	G	S	V	V	V	L	V	V	K	A	L	L	A	L	Y	N	L	S	V	D	Q	N	L	L	F	K	L	T	S	A	V	L	L	K	R	G	D	N	G	S	X	G	D	L	A	C	I	A	A	E
Template Known Secondary structure		T	T			.	.										S	T	T	T	T	T		S	T	T		S																		T	T																				T			S											T
Template Predicted Secondary structure						.	.
Template SS confidence
		80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.																								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		H	A	A	F	A	E	G	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	T	P	V	I	F	K	D	P	.	.	.	.	.	E	L	P	R	N	T	P	K	R	S	I	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	L	Y	Q	S	F	D	R	Q	K	V	A	A	W	L	E	E	E	N	L	A	T	V	L	E	R	D	W	G	F	S	I	S	Q	V	K	P	T	L	E	C	D	F	L	V	G	W	T	K	E	V	A	V	S	S	H	X	V	Q	Q	I	K	Q	N	I	N	Q	N	F	L	T	S	S	K	E	T	V	V
Template Known Secondary structure		S																			S								S													S																								T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.							.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.							.	.
Query Sequence		T	L	L	K	C	E	F	S	N	D	C	E	V	I	A	R	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	.	S	R	L	T	G	T	.	.	G	A	C	V	F	A	E	F	D	T	E	S	E	A	R	Q	V	L	E	Q	A	P
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.							.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.							.	.
Template Conservation
Template Sequence		S	L	V	E	A	L	E	Q	G	K	S	E	K	I	I	E	Q	V	E	V	A	S	K	L	L	E	G	L	S	T	D	I	Y	T	P	L	L	R	Q	L	K	E	A	S	Q	D	L	Q	A	V	A	K	S	S	G	A	G	G	G	D	C	G	I	A	L	S	F	D	A	Q	S	T	K	T	L	K	N	R	W	A
Template Known Secondary structure									T	T																					T	T	S	S										T	T	T	T	S	S							S	S		S	S	S								S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		263		.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		E	.	W	L	N	G	F	V	A	K	G	A
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		D	L	G	I	E	L	L	Y	Q	E	R	I
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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