Job Description P62615 Confidence 99.52% Date Thu Jan 5 12:07:40 GMT 2012 Rank 36 Aligned Residues 254 % Identity 15% Template c1fi4A_ PDB info PDB header:lyase Chain: A: PDB Molecule:mevalonate 5-diphosphate decarboxylase; PDBTitle: the x-ray crystal structure of mevalonate 5-diphosphate decarboxylase2 at 2.3 angstrom resolution. Resolution 2.27 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.											30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.							.	.	.														.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.							.	.	.														.
Query Sequence		R	T	Q	W	P	S	P	A	K	L	N	L	F	L	Y	I	T	G	Q	R	A	D	G	Y	H	T	L	Q	.	.	.	.	.	.	.	.	.	.	T	L	F	Q	F	L	.	.	.	D	Y	G	D	T	I	S	I	E	L	R	D	D	.	G	D	I	R	L	L	T	P	V	E	G	V	E	H	E	D	N	L	I
Query Conservation																														.	.	.	.	.	.	.	.	.	.							.	.	.														.
Alig confidence															.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.							.	.	.														.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		T	A	S	V	T	A	P	V	N	I	A	T	L	.	.	.	.	.	.	.	.	.	K	Y	W	G	K	R	D	T	K	L	N	L	P	T	N	S	S	I	S	V	T	L	S	Q	D	D	L	R	T	L	T	S	A	A	T	A	P	E	F	E	R	D	T	L	W	L	N	G	E	P	H	S	I	D	N	E	R	T
Template Known Secondary structure															.	.	.	.	.	.	.	.	.								T	T	T	T			S	S							B		T	T	T	S										T	T			S		B		T	T	T			B	S	S	S	S	S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.										.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		V	R	A	A	R	L	L	M	K	T	A	A	D	S	G	.	.	.	.	.	.	R	L	P	T	G	S	G	A	N	I	S	I	D	K	R	L	P	M	G	G	G	L	G	G	G	S	S	N	A	A	T	V	L	V	A	L	N	H	L	W	Q	C	G	L	S	M	D	E	L	A	E	M	G	L	T	L	G	A	D
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	C	L	R	D	L	R	Q	L	R	K	E	X	E	S	K	D	A	S	L	P	T	L	S	Q	W	K	L	H	I	V	S	E	N	N	F	P	T	A	A	G	L	A	S	S	A	A	G	F	A	A	L	V	S	A	I	A	K	L	Y	Q	L	P	Q	S	T	S	E	I	S	R	I	A	R	K	G	S	G	S
Template Known Secondary structure																	T	T		T	T	S			G	G	G	S												T	T	S																				T	T			S														G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure												.								.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.
Query SS confidence												.								.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.
Query Sequence		V	P	V	F	V	R	G	H	A	A	.	F	A	E	G	V	G	E	.	.	.	.	.	.	.	.	.	I	L	T	P	V	D	P	P	E	K	W	Y	L	V	A	H	P	G	V	S	I	P	.	.	.	.	T	P	V	I	F	K	D	P	E	.	.	.	.	.	.	.	L	P	R	N	T	P	K	R	S	I	E
Query Conservation												.								.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.
Alig confidence												.								.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	R	S	L	F	G	G	Y	V	A	W	E	X	G	K	A	E	D	G	H	D	S	X	A	V	Q	I	A	D	S	S	D	W	P	Q	X	K	A	C	V	L	V	V	S	D	I	K	K	D	V	S	S	T	Q	G	X	Q	L	T	V	A	T	S	E	L	F	K	E	R	I	E	H	V	V	P	K	R	F	E
Template Known Secondary structure		G	G	G	G	G	S	S	S								S		T	T		T	T									G	G	G	S	T	T												S																	S								T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.																													.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	K	C	E	F	S	N	D	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	R	K	R	F	R	E	V	D	A	V	L	S	W	L	L	E	Y	A	P	S	R	L	T	G	T	G	A	C	V	F	A	E	F	D	T	E	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation																																																																															.
Template Sequence		V	X	R	K	A	I	V	E	K	D	F	A	T	F	A	K	E	T	X	X	D	S	N	S	F	H	A	T	C	L	D	S	F	P	P	I	F	Y	X	N	D	T	S	K	R	I	I	S	W	C	H	T	I	N	Q	F	Y	G	E	T	I	V	A	Y	T	F	D	A	G	P	N	A	V	L	Y	Y	L	.	A	E
Template Known Secondary structure									T	T																						T	S	S	S																								T	S									S	S	S								.	G	G
Template Predicted Secondary structure																																																																															.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	R	Q	V	L	E	Q	A	P	E	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	S	K	L	F	A	F	I	Y	K	L	F
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions