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Job DescriptionP62615
Confidence3.52%DateThu Jan 5 12:07:40 GMT 2012
Rank96Aligned Residues35
% Identity14%Templatec1a1vA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.........280..
Predicted Secondary structure 








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Query Sequence  GACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAM
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Template Sequence  GGRHLIFCHSKKKCDELAAKLVAL. . . . . . . GINAVAYYRGL
Template Known Secondary structure  SS
SST.......T


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Template Predicted Secondary structure 






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   361........370.........380.... .....390.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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