Job Description P41065 Confidence 46.35% Date Thu Jan 5 12:01:22 GMT 2012 Rank 16 Aligned Residues 44 % Identity 18% Template c2iqjB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:stromal membrane-associated protein 1-like; PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like Resolution 1.90 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		N	R	I	R	Q	K	I	N	A	H	G	I	P	V	Y	L	C	E	A	C	G	N	P	I	P	E	A	R	R	K	I	F	P	.	.	.	.	.	.	.	G	V	T	L	C	V	E	C	Q	A	Y	Q	E	R	Q	R	K	H	Y	A
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence											.												.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation											.												.	.	.	.	.	.	.	.
Template Sequence		Q	A	V	L	A	N	L	L	L	.	E	E	D	N	K	F	C	A	D	C	Q	.	.	.	.	.	.	.	.	S	K	G	P	R	W	A	S	W	N	I	G	V	F	I	C	I	R	C	A	G	I	H	R	N	L	G	V	H	I	S
Template Known Secondary structure									T	T	.	S	G	G	G	G	B		T	T	T		.	.	.	.	.	.	.	.		B	S						T	T	T	T													T	T		T	T	T
Template Predicted Secondary structure											.												.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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